Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ly6c1P0CW02 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ly6c1P0CW02 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ly6c1P0CW02 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ly6c1P0CW02 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ly6c1P0CW02 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Ly6c1P0CW02 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ly6c1P0CW02 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ly6c1P0CW02 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ly6c1P0CW02 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC10.99□□□□□ -0.65
Ly6c1P0CW02 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ly6c1P0CW02 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ly6c1P0CW02 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ly6c1P0CW02 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ly6c1P0CW02 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ly6c1P0CW02 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ly6c1P0CW02 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ly6c1P0CW02 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
Ly6c1P0CW02 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Ly6c1P0CW02 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC10.99□□□□□ -0.65
Ly6c1P0CW02 Gm13226-201ENSMUST00000117838 404 ntBASIC10.99□□□□□ -0.65
Ly6c1P0CW02 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
Ly6c1P0CW02 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC10.99□□□□□ -0.65
Ly6c1P0CW02 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ly6c1P0CW02 Mir1982-201ENSMUST00000157368 74 ntBASIC10.99□□□□□ -0.65
Ly6c1P0CW02 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ly6c1P0CW02 Gm4271-201ENSMUST00000174444 973 ntBASIC10.99□□□□□ -0.65
Ly6c1P0CW02 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC10.99□□□□□ -0.65
Ly6c1P0CW02 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC10.99□□□□□ -0.65
Ly6c1P0CW02 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ly6c1P0CW02 Gm40466-201ENSMUST00000212174 422 ntBASIC10.99□□□□□ -0.65
Ly6c1P0CW02 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ly6c1P0CW02 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ly6c1P0CW02 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ly6c1P0CW02 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Ly6c1P0CW02 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Ly6c1P0CW02 Gm9924-202ENSMUST00000192760 2311 ntBASIC10.99□□□□□ -0.65
Ly6c1P0CW02 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ly6c1P0CW02 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC10.99□□□□□ -0.65
Ly6c1P0CW02 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ly6c1P0CW02 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ly6c1P0CW02 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ly6c1P0CW02 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC10.99□□□□□ -0.65
Ly6c1P0CW02 4930589L23Rik-201ENSMUST00000091023 1364 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ly6c1P0CW02 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Ly6c1P0CW02 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ly6c1P0CW02 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ly6c1P0CW02 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ly6c1P0CW02 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ly6c1P0CW02 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ly6c1P0CW02 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ly6c1P0CW02 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ly6c1P0CW02 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ly6c1P0CW02 0610040B10Rik-203ENSMUST00000198455 1643 ntBASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Gm15171-201ENSMUST00000122191 334 ntBASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Gm11978-201ENSMUST00000122315 466 ntBASIC10.98□□□□□ -0.65
Ly6c1P0CW02 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Gm27731-201ENSMUST00000185192 107 ntBASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Ighv10-4-201ENSMUST00000193702 299 ntBASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Gm38217-201ENSMUST00000194358 910 ntBASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Gm18944-201ENSMUST00000207672 643 ntBASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Gm18062-201ENSMUST00000208020 547 ntBASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Gm18055-201ENSMUST00000208254 547 ntBASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Gm6458-201ENSMUST00000211573 635 ntBASIC10.98□□□□□ -0.65
Ly6c1P0CW02 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Gm42928-201ENSMUST00000197338 3339 ntBASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Gm44401-201ENSMUST00000204462 2375 ntBASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ly6c1P0CW02 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC10.98□□□□□ -0.65
Ly6c1P0CW02 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms