Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rc3h2P0C090 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rc3h2P0C090 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.3□□□□□ -0.28
Rc3h2P0C090 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rc3h2P0C090 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rc3h2P0C090 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.3□□□□□ -0.28
Rc3h2P0C090 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rc3h2P0C090 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rc3h2P0C090 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rc3h2P0C090 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Rc3h2P0C090 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rc3h2P0C090 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rc3h2P0C090 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rc3h2P0C090 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rc3h2P0C090 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rc3h2P0C090 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rc3h2P0C090 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.29□□□□□ -0.28
Rc3h2P0C090 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rc3h2P0C090 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rc3h2P0C090 Mospd4-201ENSMUST00000180618 576 ntBASIC13.29□□□□□ -0.28
Rc3h2P0C090 Mir7221-201ENSMUST00000184009 72 ntBASIC13.29□□□□□ -0.28
Rc3h2P0C090 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Rc3h2P0C090 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.29□□□□□ -0.28
Rc3h2P0C090 Gm5781-201ENSMUST00000219792 443 ntBASIC13.29□□□□□ -0.28
Rc3h2P0C090 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rc3h2P0C090 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Rc3h2P0C090 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rc3h2P0C090 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rc3h2P0C090 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.29□□□□□ -0.28
Rc3h2P0C090 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rc3h2P0C090 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rc3h2P0C090 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Rc3h2P0C090 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rc3h2P0C090 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rc3h2P0C090 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rc3h2P0C090 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rc3h2P0C090 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rc3h2P0C090 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rc3h2P0C090 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rc3h2P0C090 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Rc3h2P0C090 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rc3h2P0C090 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rc3h2P0C090 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.28□□□□□ -0.28
Rc3h2P0C090 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rc3h2P0C090 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rc3h2P0C090 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rc3h2P0C090 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rc3h2P0C090 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.28□□□□□ -0.28
Rc3h2P0C090 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rc3h2P0C090 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rc3h2P0C090 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rc3h2P0C090 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rc3h2P0C090 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rc3h2P0C090 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.28□□□□□ -0.28
Rc3h2P0C090 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rc3h2P0C090 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rc3h2P0C090 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC13.28□□□□□ -0.28
Rc3h2P0C090 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.28□□□□□ -0.28
Rc3h2P0C090 Gm24548-201ENSMUST00000158650 108 ntBASIC13.28□□□□□ -0.28
Rc3h2P0C090 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Rc3h2P0C090 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rc3h2P0C090 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.28□□□□□ -0.28
Rc3h2P0C090 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.28□□□□□ -0.28
Rc3h2P0C090 Gm7046-201ENSMUST00000221351 977 ntBASIC13.28□□□□□ -0.28
Rc3h2P0C090 CT009713.10-202ENSMUST00000225734 696 ntBASIC13.28□□□□□ -0.28
Rc3h2P0C090 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC13.28□□□□□ -0.28
Rc3h2P0C090 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rc3h2P0C090 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.28□□□□□ -0.28
Rc3h2P0C090 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Rc3h2P0C090 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rc3h2P0C090 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rc3h2P0C090 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rc3h2P0C090 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Rc3h2P0C090 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rc3h2P0C090 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Rc3h2P0C090 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rc3h2P0C090 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Rc3h2P0C090 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rc3h2P0C090 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Rc3h2P0C090 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Rc3h2P0C090 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rc3h2P0C090 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rc3h2P0C090 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rc3h2P0C090 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rc3h2P0C090 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rc3h2P0C090 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.27□□□□□ -0.28
Rc3h2P0C090 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Rc3h2P0C090 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rc3h2P0C090 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rc3h2P0C090 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Rc3h2P0C090 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Rc3h2P0C090 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
Rc3h2P0C090 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Rc3h2P0C090 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.27□□□□□ -0.28
Rc3h2P0C090 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rc3h2P0C090 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rc3h2P0C090 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rc3h2P0C090 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.27□□□□□ -0.29
Rc3h2P0C090 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rc3h2P0C090 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms