Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxa4P06798 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.85□□□□□ -0.35
Hoxa4P06798 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxa4P06798 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxa4P06798 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxa4P06798 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxa4P06798 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxa4P06798 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxa4P06798 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxa4P06798 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxa4P06798 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.84□□□□□ -0.35
Hoxa4P06798 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxa4P06798 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxa4P06798 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Hoxa4P06798 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxa4P06798 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxa4P06798 Gm5187-201ENSMUST00000117317 991 ntBASIC12.84□□□□□ -0.35
Hoxa4P06798 Gm14704-201ENSMUST00000120300 874 ntBASIC12.84□□□□□ -0.35
Hoxa4P06798 Gm13813-201ENSMUST00000120998 787 ntBASIC12.84□□□□□ -0.35
Hoxa4P06798 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.84□□□□□ -0.35
Hoxa4P06798 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxa4P06798 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxa4P06798 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxa4P06798 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.84□□□□□ -0.35
Hoxa4P06798 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxa4P06798 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.84□□□□□ -0.35
Hoxa4P06798 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxa4P06798 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Hoxa4P06798 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Hoxa4P06798 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxa4P06798 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxa4P06798 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxa4P06798 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxa4P06798 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.84□□□□□ -0.35
Hoxa4P06798 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxa4P06798 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxa4P06798 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.84□□□□□ -0.35
Hoxa4P06798 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.84□□□□□ -0.35
Hoxa4P06798 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxa4P06798 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Hoxa4P06798 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.83□□□□□ -0.35
Hoxa4P06798 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.83□□□□□ -0.35
Hoxa4P06798 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Hoxa4P06798 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.83□□□□□ -0.35
Hoxa4P06798 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Hoxa4P06798 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxa4P06798 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxa4P06798 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.83□□□□□ -0.36
Hoxa4P06798 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxa4P06798 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxa4P06798 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxa4P06798 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxa4P06798 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxa4P06798 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxa4P06798 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.83□□□□□ -0.36
Hoxa4P06798 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxa4P06798 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Hoxa4P06798 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.83□□□□□ -0.36
Hoxa4P06798 Gm11591-201ENSMUST00000120063 702 ntBASIC12.83□□□□□ -0.36
Hoxa4P06798 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.83□□□□□ -0.36
Hoxa4P06798 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.83□□□□□ -0.36
Hoxa4P06798 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxa4P06798 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxa4P06798 Gm5370-201ENSMUST00000187187 574 ntBASIC12.83□□□□□ -0.36
Hoxa4P06798 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxa4P06798 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxa4P06798 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxa4P06798 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.83□□□□□ -0.36
Hoxa4P06798 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Hoxa4P06798 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxa4P06798 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
Hoxa4P06798 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxa4P06798 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxa4P06798 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Hoxa4P06798 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxa4P06798 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.83□□□□□ -0.36
Hoxa4P06798 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.83□□□□□ -0.36
Hoxa4P06798 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxa4P06798 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxa4P06798 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxa4P06798 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxa4P06798 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxa4P06798 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxa4P06798 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxa4P06798 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.82□□□□□ -0.36
Hoxa4P06798 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxa4P06798 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxa4P06798 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxa4P06798 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxa4P06798 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxa4P06798 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxa4P06798 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxa4P06798 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxa4P06798 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Hoxa4P06798 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Hoxa4P06798 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxa4P06798 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxa4P06798 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.82□□□□□ -0.36
Hoxa4P06798 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.82□□□□□ -0.36
Hoxa4P06798 Gm23363-201ENSMUST00000175024 79 ntBASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms