Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Matn4O89029 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Matn4O89029 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Matn4O89029 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.31□□□□□ -0.44
Matn4O89029 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Matn4O89029 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Matn4O89029 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Matn4O89029 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.31□□□□□ -0.44
Matn4O89029 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Matn4O89029 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Matn4O89029 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Matn4O89029 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Matn4O89029 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.31□□□□□ -0.44
Matn4O89029 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Matn4O89029 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Matn4O89029 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Matn4O89029 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Matn4O89029 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Matn4O89029 Gm15487-201ENSMUST00000122373 465 ntBASIC12.31□□□□□ -0.44
Matn4O89029 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Matn4O89029 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.31□□□□□ -0.44
Matn4O89029 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Matn4O89029 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.31□□□□□ -0.44
Matn4O89029 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Matn4O89029 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.31□□□□□ -0.44
Matn4O89029 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.31□□□□□ -0.44
Matn4O89029 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Matn4O89029 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Matn4O89029 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Matn4O89029 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Matn4O89029 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.31□□□□□ -0.44
Matn4O89029 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Matn4O89029 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Matn4O89029 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Matn4O89029 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Matn4O89029 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Matn4O89029 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Matn4O89029 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Matn4O89029 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Matn4O89029 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Matn4O89029 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Matn4O89029 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Matn4O89029 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Matn4O89029 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Matn4O89029 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Matn4O89029 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Matn4O89029 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Matn4O89029 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Matn4O89029 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Matn4O89029 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Matn4O89029 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Matn4O89029 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Matn4O89029 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Matn4O89029 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Matn4O89029 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Matn4O89029 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Matn4O89029 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Matn4O89029 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Matn4O89029 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Matn4O89029 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.3□□□□□ -0.44
Matn4O89029 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Matn4O89029 Gm38223-201ENSMUST00000194484 695 ntBASIC12.3□□□□□ -0.44
Matn4O89029 Gm44124-201ENSMUST00000204159 472 ntBASIC12.3□□□□□ -0.44
Matn4O89029 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Matn4O89029 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Matn4O89029 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Matn4O89029 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Matn4O89029 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Matn4O89029 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Matn4O89029 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Matn4O89029 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Matn4O89029 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Matn4O89029 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Matn4O89029 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Matn4O89029 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.3□□□□□ -0.44
Matn4O89029 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Matn4O89029 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Matn4O89029 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Matn4O89029 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Matn4O89029 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Matn4O89029 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Matn4O89029 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Matn4O89029 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Matn4O89029 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Matn4O89029 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Matn4O89029 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Matn4O89029 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Matn4O89029 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Matn4O89029 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Matn4O89029 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Matn4O89029 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Matn4O89029 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Matn4O89029 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Matn4O89029 Mir686-201ENSMUST00000102174 109 ntBASIC12.29□□□□□ -0.44
Matn4O89029 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Matn4O89029 Gm24694-201ENSMUST00000180054 110 ntBASIC12.29□□□□□ -0.44
Matn4O89029 Gm27838-201ENSMUST00000184829 128 ntBASIC12.29□□□□□ -0.44
Matn4O89029 Gm27663-201ENSMUST00000184839 110 ntBASIC12.29□□□□□ -0.44
Matn4O89029 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Matn4O89029 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms