Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ChkaO54804 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
ChkaO54804 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ChkaO54804 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ChkaO54804 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ChkaO54804 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
ChkaO54804 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ChkaO54804 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
ChkaO54804 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ChkaO54804 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
ChkaO54804 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ChkaO54804 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ChkaO54804 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ChkaO54804 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
ChkaO54804 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ChkaO54804 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
ChkaO54804 Gm18307-201ENSMUST00000206864 949 ntBASIC13.19□□□□□ -0.3
ChkaO54804 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ChkaO54804 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.19□□□□□ -0.3
ChkaO54804 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ChkaO54804 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
ChkaO54804 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.19□□□□□ -0.3
ChkaO54804 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
ChkaO54804 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.19□□□□□ -0.3
ChkaO54804 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ChkaO54804 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.19□□□□□ -0.3
ChkaO54804 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
ChkaO54804 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ChkaO54804 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ChkaO54804 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
ChkaO54804 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
ChkaO54804 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
ChkaO54804 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
ChkaO54804 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
ChkaO54804 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ChkaO54804 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ChkaO54804 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
ChkaO54804 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ChkaO54804 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
ChkaO54804 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.18□□□□□ -0.3
ChkaO54804 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ChkaO54804 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ChkaO54804 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ChkaO54804 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.18□□□□□ -0.3
ChkaO54804 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ChkaO54804 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ChkaO54804 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ChkaO54804 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ChkaO54804 Gm7488-201ENSMUST00000117148 684 ntBASIC13.18□□□□□ -0.3
ChkaO54804 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.18□□□□□ -0.3
ChkaO54804 Gm11978-201ENSMUST00000122315 466 ntBASIC13.18□□□□□ -0.3
ChkaO54804 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
ChkaO54804 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ChkaO54804 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.18□□□□□ -0.3
ChkaO54804 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ChkaO54804 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.18□□□□□ -0.3
ChkaO54804 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ChkaO54804 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ChkaO54804 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ChkaO54804 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ChkaO54804 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ChkaO54804 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ChkaO54804 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.18□□□□□ -0.3
ChkaO54804 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ChkaO54804 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ChkaO54804 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ChkaO54804 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.17□□□□□ -0.3
ChkaO54804 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ChkaO54804 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
ChkaO54804 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ChkaO54804 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
ChkaO54804 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ChkaO54804 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ChkaO54804 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ChkaO54804 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
ChkaO54804 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ChkaO54804 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.17□□□□□ -0.3
ChkaO54804 Gm14350-201ENSMUST00000116642 640 ntBASIC13.17□□□□□ -0.3
ChkaO54804 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.17□□□□□ -0.3
ChkaO54804 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.17□□□□□ -0.3
ChkaO54804 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.17□□□□□ -0.3
ChkaO54804 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.17□□□□□ -0.3
ChkaO54804 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ChkaO54804 Mir6977-201ENSMUST00000184960 64 ntBASIC13.17□□□□□ -0.3
ChkaO54804 Mir7654-201ENSMUST00000185082 70 ntBASIC13.17□□□□□ -0.3
ChkaO54804 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ChkaO54804 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ChkaO54804 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.17□□□□□ -0.3
ChkaO54804 Gm6983-201ENSMUST00000214912 628 ntBASIC13.17□□□□□ -0.3
ChkaO54804 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.17□□□□□ -0.3
ChkaO54804 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ChkaO54804 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
ChkaO54804 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
ChkaO54804 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ChkaO54804 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ChkaO54804 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ChkaO54804 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ChkaO54804 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
ChkaO54804 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ChkaO54804 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms