Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Matn3O35701 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Matn3O35701 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Matn3O35701 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Matn3O35701 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Matn3O35701 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Matn3O35701 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Matn3O35701 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.85□□□□□ -0.51
Matn3O35701 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Matn3O35701 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Matn3O35701 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.85□□□□□ -0.51
Matn3O35701 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC11.85□□□□□ -0.51
Matn3O35701 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC11.85□□□□□ -0.51
Matn3O35701 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC11.85□□□□□ -0.51
Matn3O35701 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Matn3O35701 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Matn3O35701 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC11.85□□□□□ -0.51
Matn3O35701 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Matn3O35701 Gm43474-201ENSMUST00000196415 774 ntBASIC11.85□□□□□ -0.51
Matn3O35701 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Matn3O35701 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC11.85□□□□□ -0.51
Matn3O35701 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Matn3O35701 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Matn3O35701 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Matn3O35701 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.85□□□□□ -0.51
Matn3O35701 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Matn3O35701 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Matn3O35701 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.85□□□□□ -0.51
Matn3O35701 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Matn3O35701 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Matn3O35701 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Matn3O35701 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC11.85□□□□□ -0.51
Matn3O35701 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Matn3O35701 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Matn3O35701 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Matn3O35701 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Matn3O35701 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Matn3O35701 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Matn3O35701 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.85□□□□□ -0.51
Matn3O35701 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Matn3O35701 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.84□□□□□ -0.51
Matn3O35701 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Matn3O35701 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Matn3O35701 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Matn3O35701 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Matn3O35701 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Matn3O35701 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Matn3O35701 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.84□□□□□ -0.51
Matn3O35701 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Matn3O35701 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Matn3O35701 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Matn3O35701 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC11.84□□□□□ -0.51
Matn3O35701 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Matn3O35701 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Matn3O35701 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Matn3O35701 Gm15770-201ENSMUST00000117498 584 ntBASIC11.84□□□□□ -0.51
Matn3O35701 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Matn3O35701 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Matn3O35701 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC11.84□□□□□ -0.51
Matn3O35701 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC11.84□□□□□ -0.51
Matn3O35701 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC11.84□□□□□ -0.51
Matn3O35701 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Matn3O35701 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Matn3O35701 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Matn3O35701 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Matn3O35701 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Matn3O35701 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Matn3O35701 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC11.84□□□□□ -0.51
Matn3O35701 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Matn3O35701 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Matn3O35701 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Matn3O35701 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Matn3O35701 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.84□□□□□ -0.51
Matn3O35701 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.84□□□□□ -0.51
Matn3O35701 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Matn3O35701 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Matn3O35701 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Matn3O35701 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Matn3O35701 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Matn3O35701 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Matn3O35701 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Matn3O35701 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Matn3O35701 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Matn3O35701 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.83□□□□□ -0.52
Matn3O35701 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Matn3O35701 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Matn3O35701 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Matn3O35701 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Matn3O35701 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Matn3O35701 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC11.83□□□□□ -0.52
Matn3O35701 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC11.83□□□□□ -0.52
Matn3O35701 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC11.83□□□□□ -0.52
Matn3O35701 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC11.83□□□□□ -0.52
Matn3O35701 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC11.83□□□□□ -0.52
Matn3O35701 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Matn3O35701 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC11.83□□□□□ -0.52
Matn3O35701 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Matn3O35701 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Matn3O35701 Gm19931-201ENSMUST00000198920 368 ntBASIC11.83□□□□□ -0.52
Matn3O35701 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms