Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Efnb3O35393 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Efnb3O35393 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Efnb3O35393 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Efnb3O35393 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Efnb3O35393 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Efnb3O35393 Zkscan3-207ENSMUST00000223831 2101 ntBASIC10.33□□□□□ -0.76
Efnb3O35393 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC10.33□□□□□ -0.76
Efnb3O35393 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Efnb3O35393 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Efnb3O35393 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Efnb3O35393 AC159621.2-201ENSMUST00000223519 1326 ntBASIC10.33□□□□□ -0.76
Efnb3O35393 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Efnb3O35393 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Efnb3O35393 Gm45266-201ENSMUST00000210111 2173 ntBASIC10.32□□□□□ -0.76
Efnb3O35393 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Efnb3O35393 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Efnb3O35393 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Efnb3O35393 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Efnb3O35393 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Efnb3O35393 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Efnb3O35393 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC10.32□□□□□ -0.76
Efnb3O35393 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Efnb3O35393 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Efnb3O35393 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC10.32□□□□□ -0.76
Efnb3O35393 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Efnb3O35393 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Efnb3O35393 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC10.32□□□□□ -0.76
Efnb3O35393 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC10.32□□□□□ -0.76
Efnb3O35393 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC10.32□□□□□ -0.76
Efnb3O35393 Gm27772-201ENSMUST00000184900 187 ntBASIC10.32□□□□□ -0.76
Efnb3O35393 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC10.32□□□□□ -0.76
Efnb3O35393 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC10.32□□□□□ -0.76
Efnb3O35393 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Efnb3O35393 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Efnb3O35393 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Efnb3O35393 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Efnb3O35393 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Efnb3O35393 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Efnb3O35393 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Efnb3O35393 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Efnb3O35393 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Efnb3O35393 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Efnb3O35393 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Efnb3O35393 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC10.32□□□□□ -0.76
Efnb3O35393 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Efnb3O35393 AC161252.3-201ENSMUST00000225465 1549 ntBASIC10.32□□□□□ -0.76
Efnb3O35393 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
Efnb3O35393 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Efnb3O35393 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Efnb3O35393 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Efnb3O35393 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Efnb3O35393 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Efnb3O35393 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Efnb3O35393 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Efnb3O35393 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Efnb3O35393 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Efnb3O35393 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Efnb3O35393 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC10.31□□□□□ -0.76
Efnb3O35393 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Efnb3O35393 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Efnb3O35393 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC10.31□□□□□ -0.76
Efnb3O35393 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Efnb3O35393 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Efnb3O35393 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Efnb3O35393 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Efnb3O35393 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Efnb3O35393 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Efnb3O35393 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Efnb3O35393 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Efnb3O35393 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Efnb3O35393 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Efnb3O35393 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Efnb3O35393 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Efnb3O35393 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Efnb3O35393 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Efnb3O35393 Gm6161-201ENSMUST00000121942 1102 ntBASIC10.31□□□□□ -0.76
Efnb3O35393 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
Efnb3O35393 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Efnb3O35393 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Efnb3O35393 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Efnb3O35393 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Efnb3O35393 Gm6254-201ENSMUST00000168178 1072 ntBASIC10.31□□□□□ -0.76
Efnb3O35393 Gm6153-201ENSMUST00000172004 1058 ntBASIC10.31□□□□□ -0.76
Efnb3O35393 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Efnb3O35393 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Efnb3O35393 Gm27618-201ENSMUST00000183671 60 ntBASIC10.31□□□□□ -0.76
Efnb3O35393 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC10.31□□□□□ -0.76
Efnb3O35393 Gm5641-202ENSMUST00000198699 1080 ntBASIC10.31□□□□□ -0.76
Efnb3O35393 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC10.31□□□□□ -0.76
Efnb3O35393 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC10.31□□□□□ -0.76
Efnb3O35393 AC159114.1-201ENSMUST00000220349 266 ntBASIC10.31□□□□□ -0.76
Efnb3O35393 CT573086.1-201ENSMUST00000227202 1074 ntBASIC10.31□□□□□ -0.76
Efnb3O35393 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Efnb3O35393 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Efnb3O35393 CT009757.3-201ENSMUST00000223367 2320 ntBASIC10.31□□□□□ -0.76
Efnb3O35393 Adra1a-206ENSMUST00000225182 2337 ntBASIC10.31□□□□□ -0.76
Efnb3O35393 Gm37015-201ENSMUST00000192763 1521 ntBASIC10.31□□□□□ -0.76
Efnb3O35393 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC10.31□□□□□ -0.76
Efnb3O35393 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms