Protein–RNA interactions for Protein: O09113

Otp, Homeobox protein orthopedia, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtpO09113 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
OtpO09113 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
OtpO09113 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
OtpO09113 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
OtpO09113 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
OtpO09113 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
OtpO09113 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
OtpO09113 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.63□□□□□ -0.55
OtpO09113 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
OtpO09113 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
OtpO09113 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
OtpO09113 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
OtpO09113 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
OtpO09113 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
OtpO09113 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
OtpO09113 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
OtpO09113 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
OtpO09113 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
OtpO09113 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.63□□□□□ -0.55
OtpO09113 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.63□□□□□ -0.55
OtpO09113 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
OtpO09113 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.63□□□□□ -0.55
OtpO09113 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
OtpO09113 Mir6392-201ENSMUST00000184924 108 ntBASIC11.63□□□□□ -0.55
OtpO09113 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
OtpO09113 Gm38144-201ENSMUST00000192790 465 ntBASIC11.63□□□□□ -0.55
OtpO09113 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
OtpO09113 Gm18307-201ENSMUST00000206864 949 ntBASIC11.63□□□□□ -0.55
OtpO09113 Gm18624-201ENSMUST00000220966 658 ntBASIC11.63□□□□□ -0.55
OtpO09113 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.63□□□□□ -0.55
OtpO09113 CT025535.1-201ENSMUST00000227172 491 ntBASIC11.63□□□□□ -0.55
OtpO09113 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
OtpO09113 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
OtpO09113 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC11.63□□□□□ -0.55
OtpO09113 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
OtpO09113 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
OtpO09113 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
OtpO09113 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
OtpO09113 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.63□□□□□ -0.55
OtpO09113 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
OtpO09113 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
OtpO09113 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
OtpO09113 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
OtpO09113 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.62□□□□□ -0.55
OtpO09113 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
OtpO09113 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
OtpO09113 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
OtpO09113 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.62□□□□□ -0.55
OtpO09113 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
OtpO09113 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
OtpO09113 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
OtpO09113 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
OtpO09113 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
OtpO09113 Gm7488-201ENSMUST00000117148 684 ntBASIC11.62□□□□□ -0.55
OtpO09113 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC11.62□□□□□ -0.55
OtpO09113 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
OtpO09113 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
OtpO09113 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
OtpO09113 Mir7221-201ENSMUST00000184009 72 ntBASIC11.62□□□□□ -0.55
OtpO09113 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
OtpO09113 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.62□□□□□ -0.55
OtpO09113 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
OtpO09113 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
OtpO09113 Gm7446-201ENSMUST00000221035 1240 ntBASIC11.62□□□□□ -0.55
OtpO09113 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.62□□□□□ -0.55
OtpO09113 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
OtpO09113 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
OtpO09113 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
OtpO09113 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
OtpO09113 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
OtpO09113 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
OtpO09113 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
OtpO09113 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
OtpO09113 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
OtpO09113 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
OtpO09113 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.62□□□□□ -0.55
OtpO09113 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.62□□□□□ -0.55
OtpO09113 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
OtpO09113 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
OtpO09113 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.62□□□□□ -0.55
OtpO09113 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
OtpO09113 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
OtpO09113 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
OtpO09113 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.62□□□□□ -0.55
OtpO09113 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
OtpO09113 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
OtpO09113 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
OtpO09113 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
OtpO09113 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
OtpO09113 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
OtpO09113 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
OtpO09113 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
OtpO09113 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
OtpO09113 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
OtpO09113 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
OtpO09113 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
OtpO09113 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
OtpO09113 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
OtpO09113 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
OtpO09113 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms