Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Shisa8J3QNX5 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Shisa8J3QNX5 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Shisa8J3QNX5 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shisa8J3QNX5 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shisa8J3QNX5 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shisa8J3QNX5 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shisa8J3QNX5 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC11.9□□□□□ -0.5
Shisa8J3QNX5 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.9□□□□□ -0.5
Shisa8J3QNX5 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shisa8J3QNX5 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shisa8J3QNX5 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.9□□□□□ -0.5
Shisa8J3QNX5 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shisa8J3QNX5 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.9□□□□□ -0.5
Shisa8J3QNX5 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shisa8J3QNX5 Mir449b-201ENSMUST00000104833 80 ntBASIC11.9□□□□□ -0.5
Shisa8J3QNX5 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shisa8J3QNX5 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Shisa8J3QNX5 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC11.9□□□□□ -0.5
Shisa8J3QNX5 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Shisa8J3QNX5 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC11.9□□□□□ -0.5
Shisa8J3QNX5 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC11.9□□□□□ -0.5
Shisa8J3QNX5 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shisa8J3QNX5 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Shisa8J3QNX5 Gm18905-201ENSMUST00000205454 928 ntBASIC11.9□□□□□ -0.5
Shisa8J3QNX5 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Shisa8J3QNX5 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shisa8J3QNX5 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shisa8J3QNX5 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shisa8J3QNX5 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shisa8J3QNX5 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shisa8J3QNX5 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shisa8J3QNX5 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shisa8J3QNX5 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shisa8J3QNX5 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shisa8J3QNX5 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shisa8J3QNX5 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Shisa8J3QNX5 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Shisa8J3QNX5 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.9□□□□□ -0.5
Shisa8J3QNX5 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.9□□□□□ -0.5
Shisa8J3QNX5 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shisa8J3QNX5 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shisa8J3QNX5 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shisa8J3QNX5 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Shisa8J3QNX5 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shisa8J3QNX5 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Shisa8J3QNX5 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Shisa8J3QNX5 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.89□□□□□ -0.51
Shisa8J3QNX5 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shisa8J3QNX5 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shisa8J3QNX5 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.89□□□□□ -0.51
Shisa8J3QNX5 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shisa8J3QNX5 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Shisa8J3QNX5 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shisa8J3QNX5 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shisa8J3QNX5 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shisa8J3QNX5 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.89□□□□□ -0.51
Shisa8J3QNX5 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Shisa8J3QNX5 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shisa8J3QNX5 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Shisa8J3QNX5 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shisa8J3QNX5 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Shisa8J3QNX5 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shisa8J3QNX5 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shisa8J3QNX5 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shisa8J3QNX5 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Shisa8J3QNX5 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Shisa8J3QNX5 Gm14822-201ENSMUST00000122247 291 ntBASIC11.89□□□□□ -0.51
Shisa8J3QNX5 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shisa8J3QNX5 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC11.89□□□□□ -0.51
Shisa8J3QNX5 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Shisa8J3QNX5 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Shisa8J3QNX5 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shisa8J3QNX5 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shisa8J3QNX5 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shisa8J3QNX5 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.89□□□□□ -0.51
Shisa8J3QNX5 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shisa8J3QNX5 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.89□□□□□ -0.51
Shisa8J3QNX5 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shisa8J3QNX5 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Shisa8J3QNX5 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shisa8J3QNX5 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shisa8J3QNX5 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.89□□□□□ -0.51
Shisa8J3QNX5 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shisa8J3QNX5 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shisa8J3QNX5 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Shisa8J3QNX5 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Shisa8J3QNX5 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shisa8J3QNX5 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.89□□□□□ -0.51
Shisa8J3QNX5 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Shisa8J3QNX5 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Shisa8J3QNX5 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Shisa8J3QNX5 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.88□□□□□ -0.51
Shisa8J3QNX5 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.88□□□□□ -0.51
Shisa8J3QNX5 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Shisa8J3QNX5 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Shisa8J3QNX5 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.88□□□□□ -0.51
Shisa8J3QNX5 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Shisa8J3QNX5 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Shisa8J3QNX5 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms