Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Colca2F8VPY8 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.25□□□□□ -0.45
Colca2F8VPY8 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Colca2F8VPY8 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Colca2F8VPY8 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Colca2F8VPY8 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Colca2F8VPY8 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Colca2F8VPY8 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Colca2F8VPY8 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Colca2F8VPY8 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Colca2F8VPY8 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC12.24□□□□□ -0.45
Colca2F8VPY8 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Colca2F8VPY8 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Colca2F8VPY8 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Colca2F8VPY8 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Colca2F8VPY8 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Colca2F8VPY8 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Colca2F8VPY8 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Colca2F8VPY8 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.24□□□□□ -0.45
Colca2F8VPY8 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.24□□□□□ -0.45
Colca2F8VPY8 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.24□□□□□ -0.45
Colca2F8VPY8 Gm11941-201ENSMUST00000119904 610 ntBASIC12.24□□□□□ -0.45
Colca2F8VPY8 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Colca2F8VPY8 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Colca2F8VPY8 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Colca2F8VPY8 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Colca2F8VPY8 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Colca2F8VPY8 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.24□□□□□ -0.45
Colca2F8VPY8 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Colca2F8VPY8 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.24□□□□□ -0.45
Colca2F8VPY8 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Colca2F8VPY8 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.24□□□□□ -0.45
Colca2F8VPY8 AC159103.1-201ENSMUST00000228325 429 ntBASIC12.24□□□□□ -0.45
Colca2F8VPY8 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Colca2F8VPY8 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Colca2F8VPY8 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Colca2F8VPY8 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Colca2F8VPY8 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Colca2F8VPY8 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Colca2F8VPY8 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Colca2F8VPY8 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Colca2F8VPY8 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Colca2F8VPY8 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Colca2F8VPY8 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.24□□□□□ -0.45
Colca2F8VPY8 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Colca2F8VPY8 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Colca2F8VPY8 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Colca2F8VPY8 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Colca2F8VPY8 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Colca2F8VPY8 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Colca2F8VPY8 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Colca2F8VPY8 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Colca2F8VPY8 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Colca2F8VPY8 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Colca2F8VPY8 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Colca2F8VPY8 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Colca2F8VPY8 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Colca2F8VPY8 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Colca2F8VPY8 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Colca2F8VPY8 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Colca2F8VPY8 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Colca2F8VPY8 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.23□□□□□ -0.45
Colca2F8VPY8 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.23□□□□□ -0.45
Colca2F8VPY8 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Colca2F8VPY8 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Colca2F8VPY8 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Colca2F8VPY8 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Colca2F8VPY8 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Colca2F8VPY8 Gm14058-201ENSMUST00000116082 735 ntBASIC12.23□□□□□ -0.45
Colca2F8VPY8 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Colca2F8VPY8 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC12.23□□□□□ -0.45
Colca2F8VPY8 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Colca2F8VPY8 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Colca2F8VPY8 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC12.23□□□□□ -0.45
Colca2F8VPY8 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Colca2F8VPY8 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.23□□□□□ -0.45
Colca2F8VPY8 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Colca2F8VPY8 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Colca2F8VPY8 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Colca2F8VPY8 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Colca2F8VPY8 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Colca2F8VPY8 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Colca2F8VPY8 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Colca2F8VPY8 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Colca2F8VPY8 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Colca2F8VPY8 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Colca2F8VPY8 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Colca2F8VPY8 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Colca2F8VPY8 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Colca2F8VPY8 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Colca2F8VPY8 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Colca2F8VPY8 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.22□□□□□ -0.45
Colca2F8VPY8 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Colca2F8VPY8 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Colca2F8VPY8 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.22□□□□□ -0.45
Colca2F8VPY8 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Colca2F8VPY8 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Colca2F8VPY8 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Colca2F8VPY8 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Colca2F8VPY8 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms