Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh9F8VPK8 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh9F8VPK8 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh9F8VPK8 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh9F8VPK8 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh9F8VPK8 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh9F8VPK8 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh9F8VPK8 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh9F8VPK8 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Pcdh9F8VPK8 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Pcdh9F8VPK8 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.38□□□□□ -0.27
Pcdh9F8VPK8 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pcdh9F8VPK8 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Pcdh9F8VPK8 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh9F8VPK8 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.38□□□□□ -0.27
Pcdh9F8VPK8 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Pcdh9F8VPK8 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh9F8VPK8 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh9F8VPK8 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh9F8VPK8 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh9F8VPK8 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh9F8VPK8 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh9F8VPK8 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Pcdh9F8VPK8 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.37□□□□□ -0.27
Pcdh9F8VPK8 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh9F8VPK8 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh9F8VPK8 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh9F8VPK8 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh9F8VPK8 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh9F8VPK8 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdh9F8VPK8 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.37□□□□□ -0.27
Pcdh9F8VPK8 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.37□□□□□ -0.27
Pcdh9F8VPK8 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdh9F8VPK8 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.37□□□□□ -0.27
Pcdh9F8VPK8 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh9F8VPK8 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Pcdh9F8VPK8 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh9F8VPK8 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.37□□□□□ -0.27
Pcdh9F8VPK8 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Pcdh9F8VPK8 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.37□□□□□ -0.27
Pcdh9F8VPK8 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdh9F8VPK8 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh9F8VPK8 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh9F8VPK8 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Pcdh9F8VPK8 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh9F8VPK8 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh9F8VPK8 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh9F8VPK8 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh9F8VPK8 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.37□□□□□ -0.27
Pcdh9F8VPK8 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh9F8VPK8 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh9F8VPK8 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh9F8VPK8 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh9F8VPK8 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh9F8VPK8 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh9F8VPK8 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh9F8VPK8 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh9F8VPK8 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh9F8VPK8 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh9F8VPK8 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh9F8VPK8 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh9F8VPK8 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh9F8VPK8 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh9F8VPK8 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh9F8VPK8 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh9F8VPK8 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh9F8VPK8 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Pcdh9F8VPK8 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.36□□□□□ -0.27
Pcdh9F8VPK8 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh9F8VPK8 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh9F8VPK8 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh9F8VPK8 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Pcdh9F8VPK8 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh9F8VPK8 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.36□□□□□ -0.27
Pcdh9F8VPK8 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh9F8VPK8 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh9F8VPK8 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh9F8VPK8 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh9F8VPK8 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh9F8VPK8 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.36□□□□□ -0.27
Pcdh9F8VPK8 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh9F8VPK8 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.36□□□□□ -0.27
Pcdh9F8VPK8 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.36□□□□□ -0.27
Pcdh9F8VPK8 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh9F8VPK8 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh9F8VPK8 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh9F8VPK8 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh9F8VPK8 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh9F8VPK8 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh9F8VPK8 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh9F8VPK8 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh9F8VPK8 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh9F8VPK8 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh9F8VPK8 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh9F8VPK8 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Pcdh9F8VPK8 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Pcdh9F8VPK8 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.35□□□□□ -0.27
Pcdh9F8VPK8 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh9F8VPK8 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh9F8VPK8 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms