Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Atf6F6VAN0 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Atf6F6VAN0 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Atf6F6VAN0 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Atf6F6VAN0 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Atf6F6VAN0 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Atf6F6VAN0 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Atf6F6VAN0 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Atf6F6VAN0 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Atf6F6VAN0 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Atf6F6VAN0 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Atf6F6VAN0 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Atf6F6VAN0 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Atf6F6VAN0 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Atf6F6VAN0 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Atf6F6VAN0 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Atf6F6VAN0 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Atf6F6VAN0 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Atf6F6VAN0 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Atf6F6VAN0 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Atf6F6VAN0 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Atf6F6VAN0 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.41□□□□□ -0.26
Atf6F6VAN0 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Atf6F6VAN0 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Atf6F6VAN0 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Atf6F6VAN0 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Atf6F6VAN0 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Atf6F6VAN0 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Atf6F6VAN0 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.41□□□□□ -0.26
Atf6F6VAN0 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Atf6F6VAN0 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.41□□□□□ -0.26
Atf6F6VAN0 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Atf6F6VAN0 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Atf6F6VAN0 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Atf6F6VAN0 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Atf6F6VAN0 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Atf6F6VAN0 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.41□□□□□ -0.26
Atf6F6VAN0 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.41□□□□□ -0.26
Atf6F6VAN0 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Atf6F6VAN0 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Atf6F6VAN0 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Atf6F6VAN0 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Atf6F6VAN0 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.41□□□□□ -0.26
Atf6F6VAN0 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Atf6F6VAN0 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Atf6F6VAN0 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.41□□□□□ -0.26
Atf6F6VAN0 Gm45384-201ENSMUST00000210451 277 ntBASIC13.41□□□□□ -0.26
Atf6F6VAN0 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.41□□□□□ -0.26
Atf6F6VAN0 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Atf6F6VAN0 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.41□□□□□ -0.26
Atf6F6VAN0 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Atf6F6VAN0 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Atf6F6VAN0 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Atf6F6VAN0 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Atf6F6VAN0 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Atf6F6VAN0 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Atf6F6VAN0 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Atf6F6VAN0 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Atf6F6VAN0 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Atf6F6VAN0 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Atf6F6VAN0 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Atf6F6VAN0 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Atf6F6VAN0 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Atf6F6VAN0 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Atf6F6VAN0 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Atf6F6VAN0 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Atf6F6VAN0 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Atf6F6VAN0 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Atf6F6VAN0 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Atf6F6VAN0 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Atf6F6VAN0 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.4□□□□□ -0.26
Atf6F6VAN0 Gm44069-201ENSMUST00000204898 506 ntBASIC13.4□□□□□ -0.26
Atf6F6VAN0 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.4□□□□□ -0.26
Atf6F6VAN0 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Atf6F6VAN0 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Atf6F6VAN0 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Atf6F6VAN0 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Atf6F6VAN0 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Atf6F6VAN0 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Atf6F6VAN0 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Atf6F6VAN0 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Atf6F6VAN0 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Atf6F6VAN0 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Atf6F6VAN0 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Atf6F6VAN0 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Atf6F6VAN0 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Atf6F6VAN0 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Atf6F6VAN0 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
Atf6F6VAN0 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Atf6F6VAN0 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Atf6F6VAN0 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Atf6F6VAN0 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.39□□□□□ -0.27
Atf6F6VAN0 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Atf6F6VAN0 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Atf6F6VAN0 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Atf6F6VAN0 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Atf6F6VAN0 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Atf6F6VAN0 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Atf6F6VAN0 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Atf6F6VAN0 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms