Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Ube4aE9Q735 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ube4aE9Q735 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ube4aE9Q735 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ube4aE9Q735 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ube4aE9Q735 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ube4aE9Q735 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ube4aE9Q735 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ube4aE9Q735 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ube4aE9Q735 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ube4aE9Q735 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ube4aE9Q735 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC15.6■□□□□ 0.09
Ube4aE9Q735 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
Ube4aE9Q735 AC154262.2-201ENSMUST00000224310 2293 ntBASIC15.6■□□□□ 0.09
Ube4aE9Q735 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ube4aE9Q735 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ube4aE9Q735 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC15.6■□□□□ 0.09
Ube4aE9Q735 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Ube4aE9Q735 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC15.6■□□□□ 0.09
Ube4aE9Q735 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ube4aE9Q735 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ube4aE9Q735 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ube4aE9Q735 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ube4aE9Q735 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC15.6■□□□□ 0.09
Ube4aE9Q735 Gm15276-201ENSMUST00000145953 498 ntBASIC15.6■□□□□ 0.09
Ube4aE9Q735 Gm25043-201ENSMUST00000158604 212 ntBASIC15.6■□□□□ 0.09
Ube4aE9Q735 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ube4aE9Q735 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC15.6■□□□□ 0.09
Ube4aE9Q735 Gm8885-201ENSMUST00000189382 598 ntBASIC15.6■□□□□ 0.09
Ube4aE9Q735 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC15.6■□□□□ 0.09
Ube4aE9Q735 Gm44967-201ENSMUST00000207047 631 ntBASIC15.6■□□□□ 0.09
Ube4aE9Q735 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Ube4aE9Q735 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC15.6■□□□□ 0.09
Ube4aE9Q735 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC15.6■□□□□ 0.09
Ube4aE9Q735 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ube4aE9Q735 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ube4aE9Q735 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ube4aE9Q735 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ube4aE9Q735 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ube4aE9Q735 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ube4aE9Q735 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ube4aE9Q735 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Ube4aE9Q735 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ube4aE9Q735 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ube4aE9Q735 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ube4aE9Q735 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ube4aE9Q735 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC15.6■□□□□ 0.09
Ube4aE9Q735 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ube4aE9Q735 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ube4aE9Q735 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Ube4aE9Q735 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ube4aE9Q735 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ube4aE9Q735 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ube4aE9Q735 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ube4aE9Q735 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ube4aE9Q735 AC113441.2-201ENSMUST00000221538 1468 ntBASIC15.59■□□□□ 0.09
Ube4aE9Q735 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC15.59■□□□□ 0.09
Ube4aE9Q735 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ube4aE9Q735 AC122314.1-201ENSMUST00000223056 2239 ntBASIC15.59■□□□□ 0.09
Ube4aE9Q735 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ube4aE9Q735 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ube4aE9Q735 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ube4aE9Q735 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ube4aE9Q735 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ube4aE9Q735 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ube4aE9Q735 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC15.59■□□□□ 0.09
Ube4aE9Q735 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ube4aE9Q735 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ube4aE9Q735 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ube4aE9Q735 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ube4aE9Q735 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Ube4aE9Q735 AA914427-201ENSMUST00000193194 1166 ntBASIC15.59■□□□□ 0.09
Ube4aE9Q735 Gm45186-201ENSMUST00000206874 478 ntBASIC15.59■□□□□ 0.09
Ube4aE9Q735 Gm5363-201ENSMUST00000211927 938 ntBASIC15.59■□□□□ 0.09
Ube4aE9Q735 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC15.59■□□□□ 0.09
Ube4aE9Q735 CT030182.1-201ENSMUST00000225935 533 ntBASIC15.59■□□□□ 0.09
Ube4aE9Q735 AC108416.1-202ENSMUST00000228927 1201 ntBASIC15.59■□□□□ 0.09
Ube4aE9Q735 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ube4aE9Q735 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ube4aE9Q735 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ube4aE9Q735 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ube4aE9Q735 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ube4aE9Q735 Gm44094-201ENSMUST00000204703 2030 ntBASIC15.59■□□□□ 0.09
Ube4aE9Q735 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
Ube4aE9Q735 Gm8798-201ENSMUST00000211877 1661 ntBASIC15.59■□□□□ 0.09
Ube4aE9Q735 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ube4aE9Q735 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Ube4aE9Q735 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ube4aE9Q735 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC15.59■□□□□ 0.09
Ube4aE9Q735 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ube4aE9Q735 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ube4aE9Q735 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ube4aE9Q735 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ube4aE9Q735 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ube4aE9Q735 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ube4aE9Q735 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ube4aE9Q735 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Ube4aE9Q735 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Ube4aE9Q735 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ube4aE9Q735 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms