Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm28043E0CXC2 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm28043E0CXC2 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm28043E0CXC2 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm28043E0CXC2 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm28043E0CXC2 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Gm28043E0CXC2 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.1□□□□□ -0.31
Gm28043E0CXC2 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.1□□□□□ -0.31
Gm28043E0CXC2 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm28043E0CXC2 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.1□□□□□ -0.31
Gm28043E0CXC2 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm28043E0CXC2 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm28043E0CXC2 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Gm28043E0CXC2 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Gm28043E0CXC2 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Gm28043E0CXC2 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Gm28043E0CXC2 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.1□□□□□ -0.31
Gm28043E0CXC2 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Gm28043E0CXC2 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.1□□□□□ -0.31
Gm28043E0CXC2 Gm44855-201ENSMUST00000205725 362 ntBASIC13.1□□□□□ -0.31
Gm28043E0CXC2 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Gm28043E0CXC2 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.1□□□□□ -0.31
Gm28043E0CXC2 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm28043E0CXC2 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Gm28043E0CXC2 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm28043E0CXC2 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm28043E0CXC2 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Gm28043E0CXC2 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm28043E0CXC2 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.1□□□□□ -0.31
Gm28043E0CXC2 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm28043E0CXC2 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm28043E0CXC2 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.1□□□□□ -0.31
Gm28043E0CXC2 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Gm28043E0CXC2 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm28043E0CXC2 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.1□□□□□ -0.31
Gm28043E0CXC2 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm28043E0CXC2 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm28043E0CXC2 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Gm28043E0CXC2 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Gm28043E0CXC2 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm28043E0CXC2 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.1□□□□□ -0.31
Gm28043E0CXC2 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm28043E0CXC2 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Gm28043E0CXC2 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gm28043E0CXC2 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC13.09□□□□□ -0.31
Gm28043E0CXC2 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gm28043E0CXC2 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Gm28043E0CXC2 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gm28043E0CXC2 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gm28043E0CXC2 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gm28043E0CXC2 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gm28043E0CXC2 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gm28043E0CXC2 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Gm28043E0CXC2 Gm43868-201ENSMUST00000205187 2114 ntBASIC13.09□□□□□ -0.31
Gm28043E0CXC2 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Gm28043E0CXC2 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gm28043E0CXC2 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.09□□□□□ -0.31
Gm28043E0CXC2 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gm28043E0CXC2 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Gm28043E0CXC2 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Gm28043E0CXC2 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Gm28043E0CXC2 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.09□□□□□ -0.31
Gm28043E0CXC2 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gm28043E0CXC2 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gm28043E0CXC2 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Gm28043E0CXC2 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gm28043E0CXC2 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gm28043E0CXC2 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gm28043E0CXC2 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Gm28043E0CXC2 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Gm28043E0CXC2 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gm28043E0CXC2 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gm28043E0CXC2 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.09□□□□□ -0.31
Gm28043E0CXC2 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gm28043E0CXC2 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 387.8 ms