Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shank1D3YZU1 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shank1D3YZU1 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shank1D3YZU1 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.7□□□□□ -0.54
Shank1D3YZU1 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.7□□□□□ -0.54
Shank1D3YZU1 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shank1D3YZU1 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Shank1D3YZU1 Gm12502-201ENSMUST00000120197 444 ntBASIC11.69□□□□□ -0.54
Shank1D3YZU1 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shank1D3YZU1 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Shank1D3YZU1 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Shank1D3YZU1 Gm44262-201ENSMUST00000204969 372 ntBASIC11.69□□□□□ -0.54
Shank1D3YZU1 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Shank1D3YZU1 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.69□□□□□ -0.54
Shank1D3YZU1 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shank1D3YZU1 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shank1D3YZU1 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Shank1D3YZU1 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Shank1D3YZU1 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.69□□□□□ -0.54
Shank1D3YZU1 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shank1D3YZU1 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Shank1D3YZU1 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shank1D3YZU1 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.69□□□□□ -0.54
Shank1D3YZU1 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Shank1D3YZU1 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shank1D3YZU1 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shank1D3YZU1 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Shank1D3YZU1 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shank1D3YZU1 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.69□□□□□ -0.54
Shank1D3YZU1 n-R5s14-201ENSMUST00000122688 107 ntBASIC11.69□□□□□ -0.54
Shank1D3YZU1 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Shank1D3YZU1 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.69□□□□□ -0.54
Shank1D3YZU1 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.69□□□□□ -0.54
Shank1D3YZU1 Gm37835-201ENSMUST00000193305 361 ntBASIC11.69□□□□□ -0.54
Shank1D3YZU1 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.69□□□□□ -0.54
Shank1D3YZU1 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shank1D3YZU1 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shank1D3YZU1 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shank1D3YZU1 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shank1D3YZU1 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shank1D3YZU1 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Shank1D3YZU1 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shank1D3YZU1 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Shank1D3YZU1 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shank1D3YZU1 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shank1D3YZU1 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Shank1D3YZU1 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shank1D3YZU1 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shank1D3YZU1 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shank1D3YZU1 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Shank1D3YZU1 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shank1D3YZU1 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shank1D3YZU1 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shank1D3YZU1 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shank1D3YZU1 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shank1D3YZU1 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shank1D3YZU1 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Shank1D3YZU1 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC11.68□□□□□ -0.54
Shank1D3YZU1 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Shank1D3YZU1 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shank1D3YZU1 Gm27046-201ENSMUST00000182160 463 ntBASIC11.68□□□□□ -0.54
Shank1D3YZU1 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.68□□□□□ -0.54
Shank1D3YZU1 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC11.68□□□□□ -0.54
Shank1D3YZU1 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.68□□□□□ -0.54
Shank1D3YZU1 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Shank1D3YZU1 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Shank1D3YZU1 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.68□□□□□ -0.54
Shank1D3YZU1 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Shank1D3YZU1 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Shank1D3YZU1 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shank1D3YZU1 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shank1D3YZU1 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shank1D3YZU1 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.68□□□□□ -0.54
Shank1D3YZU1 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shank1D3YZU1 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shank1D3YZU1 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shank1D3YZU1 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shank1D3YZU1 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shank1D3YZU1 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shank1D3YZU1 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shank1D3YZU1 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shank1D3YZU1 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shank1D3YZU1 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Shank1D3YZU1 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Shank1D3YZU1 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Shank1D3YZU1 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.68□□□□□ -0.54
Shank1D3YZU1 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Shank1D3YZU1 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Shank1D3YZU1 Gm44126-201ENSMUST00000204831 514 ntBASIC11.68□□□□□ -0.54
Shank1D3YZU1 Gm32025-201ENSMUST00000217960 307 ntBASIC11.68□□□□□ -0.54
Shank1D3YZU1 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shank1D3YZU1 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shank1D3YZU1 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shank1D3YZU1 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shank1D3YZU1 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Shank1D3YZU1 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shank1D3YZU1 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC11.68□□□□□ -0.54
Shank1D3YZU1 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Shank1D3YZU1 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shank1D3YZU1 Il17rd-203ENSMUST00000225146 3366 ntBASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms