Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx8D3YU81 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.84□□□□□ -0.19
Rfx8D3YU81 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.84□□□□□ -0.19
Rfx8D3YU81 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx8D3YU81 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.84□□□□□ -0.19
Rfx8D3YU81 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.84□□□□□ -0.19
Rfx8D3YU81 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.84□□□□□ -0.19
Rfx8D3YU81 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx8D3YU81 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx8D3YU81 Gm10012-201ENSMUST00000078252 192 ntBASIC13.84□□□□□ -0.19
Rfx8D3YU81 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Rfx8D3YU81 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx8D3YU81 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Rfx8D3YU81 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx8D3YU81 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx8D3YU81 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Rfx8D3YU81 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx8D3YU81 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx8D3YU81 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.84□□□□□ -0.19
Rfx8D3YU81 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx8D3YU81 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx8D3YU81 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.84□□□□□ -0.19
Rfx8D3YU81 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx8D3YU81 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.84□□□□□ -0.19
Rfx8D3YU81 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx8D3YU81 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx8D3YU81 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.84□□□□□ -0.19
Rfx8D3YU81 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx8D3YU81 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rfx8D3YU81 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.83□□□□□ -0.19
Rfx8D3YU81 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rfx8D3YU81 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rfx8D3YU81 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.83□□□□□ -0.2
Rfx8D3YU81 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx8D3YU81 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx8D3YU81 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx8D3YU81 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx8D3YU81 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx8D3YU81 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.83□□□□□ -0.2
Rfx8D3YU81 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx8D3YU81 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx8D3YU81 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx8D3YU81 Gm24196-201ENSMUST00000179161 110 ntBASIC13.83□□□□□ -0.2
Rfx8D3YU81 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx8D3YU81 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx8D3YU81 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx8D3YU81 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.83□□□□□ -0.2
Rfx8D3YU81 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.83□□□□□ -0.2
Rfx8D3YU81 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.83□□□□□ -0.2
Rfx8D3YU81 Gm8598-201ENSMUST00000221184 836 ntBASIC13.83□□□□□ -0.2
Rfx8D3YU81 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx8D3YU81 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx8D3YU81 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx8D3YU81 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.83□□□□□ -0.2
Rfx8D3YU81 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.83□□□□□ -0.2
Rfx8D3YU81 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.83□□□□□ -0.2
Rfx8D3YU81 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx8D3YU81 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.83□□□□□ -0.2
Rfx8D3YU81 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx8D3YU81 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx8D3YU81 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx8D3YU81 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx8D3YU81 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Rfx8D3YU81 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx8D3YU81 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx8D3YU81 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx8D3YU81 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Rfx8D3YU81 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx8D3YU81 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx8D3YU81 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx8D3YU81 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.82□□□□□ -0.2
Rfx8D3YU81 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx8D3YU81 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.82□□□□□ -0.2
Rfx8D3YU81 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx8D3YU81 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.82□□□□□ -0.2
Rfx8D3YU81 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.82□□□□□ -0.2
Rfx8D3YU81 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Rfx8D3YU81 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx8D3YU81 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx8D3YU81 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx8D3YU81 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx8D3YU81 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx8D3YU81 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.82□□□□□ -0.2
Rfx8D3YU81 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx8D3YU81 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx8D3YU81 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx8D3YU81 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx8D3YU81 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Rfx8D3YU81 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx8D3YU81 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx8D3YU81 Proscos-202ENSMUST00000178990 666 ntBASIC13.82□□□□□ -0.2
Rfx8D3YU81 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.82□□□□□ -0.2
Rfx8D3YU81 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx8D3YU81 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Rfx8D3YU81 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx8D3YU81 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx8D3YU81 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx8D3YU81 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx8D3YU81 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx8D3YU81 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms