Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scn7aB1AYL1 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scn7aB1AYL1 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scn7aB1AYL1 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scn7aB1AYL1 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scn7aB1AYL1 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Scn7aB1AYL1 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
Scn7aB1AYL1 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Scn7aB1AYL1 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scn7aB1AYL1 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
Scn7aB1AYL1 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scn7aB1AYL1 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scn7aB1AYL1 Gm3052-202ENSMUST00000188254 2224 ntBASIC16.44■□□□□ 0.22
Scn7aB1AYL1 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.44■□□□□ 0.22
Scn7aB1AYL1 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC16.44■□□□□ 0.22
Scn7aB1AYL1 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn7aB1AYL1 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Scn7aB1AYL1 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn7aB1AYL1 Gm15711-201ENSMUST00000118889 535 ntBASIC16.43■□□□□ 0.22
Scn7aB1AYL1 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Scn7aB1AYL1 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn7aB1AYL1 Gm45909-201ENSMUST00000212413 1031 ntBASIC16.43■□□□□ 0.22
Scn7aB1AYL1 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC16.43■□□□□ 0.22
Scn7aB1AYL1 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC16.43■□□□□ 0.22
Scn7aB1AYL1 Gm270-201ENSMUST00000223010 976 ntBASIC16.43■□□□□ 0.22
Scn7aB1AYL1 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn7aB1AYL1 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn7aB1AYL1 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Scn7aB1AYL1 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Scn7aB1AYL1 Gm43081-201ENSMUST00000199082 1380 ntBASIC16.43■□□□□ 0.22
Scn7aB1AYL1 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn7aB1AYL1 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Scn7aB1AYL1 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn7aB1AYL1 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn7aB1AYL1 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn7aB1AYL1 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Scn7aB1AYL1 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Scn7aB1AYL1 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn7aB1AYL1 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Scn7aB1AYL1 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC16.43■□□□□ 0.22
Scn7aB1AYL1 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Scn7aB1AYL1 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn7aB1AYL1 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn7aB1AYL1 Gm5523-201ENSMUST00000180415 997 ntBASIC16.43■□□□□ 0.22
Scn7aB1AYL1 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC16.43■□□□□ 0.22
Scn7aB1AYL1 Mir7686-201ENSMUST00000200604 57 ntBASIC16.43■□□□□ 0.22
Scn7aB1AYL1 AC125486.1-201ENSMUST00000218701 320 ntBASIC16.43■□□□□ 0.22
Scn7aB1AYL1 Gm18556-201ENSMUST00000219748 1031 ntBASIC16.43■□□□□ 0.22
Scn7aB1AYL1 CT009713.8-201ENSMUST00000225448 560 ntBASIC16.43■□□□□ 0.22
Scn7aB1AYL1 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn7aB1AYL1 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn7aB1AYL1 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn7aB1AYL1 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Scn7aB1AYL1 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn7aB1AYL1 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn7aB1AYL1 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn7aB1AYL1 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn7aB1AYL1 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Scn7aB1AYL1 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Scn7aB1AYL1 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC16.42■□□□□ 0.22
Scn7aB1AYL1 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn7aB1AYL1 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn7aB1AYL1 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn7aB1AYL1 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn7aB1AYL1 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn7aB1AYL1 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn7aB1AYL1 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Scn7aB1AYL1 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Scn7aB1AYL1 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn7aB1AYL1 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn7aB1AYL1 Gm7851-201ENSMUST00000117574 323 ntBASIC16.42■□□□□ 0.22
Scn7aB1AYL1 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC16.42■□□□□ 0.22
Scn7aB1AYL1 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC16.42■□□□□ 0.22
Scn7aB1AYL1 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC16.42■□□□□ 0.22
Scn7aB1AYL1 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC16.42■□□□□ 0.22
Scn7aB1AYL1 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn7aB1AYL1 Gm10710-201ENSMUST00000047876 3971 ntBASIC16.42■□□□□ 0.22
Scn7aB1AYL1 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn7aB1AYL1 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn7aB1AYL1 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn7aB1AYL1 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn7aB1AYL1 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn7aB1AYL1 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn7aB1AYL1 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn7aB1AYL1 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn7aB1AYL1 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn7aB1AYL1 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Scn7aB1AYL1 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn7aB1AYL1 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn7aB1AYL1 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn7aB1AYL1 Gm30238-201ENSMUST00000195528 2603 ntBASIC16.41■□□□□ 0.22
Scn7aB1AYL1 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Scn7aB1AYL1 Gm14058-201ENSMUST00000116082 735 ntBASIC16.41■□□□□ 0.22
Scn7aB1AYL1 Gm11509-201ENSMUST00000117358 325 ntBASIC16.41■□□□□ 0.22
Scn7aB1AYL1 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC16.41■□□□□ 0.22
Scn7aB1AYL1 Gm18038-201ENSMUST00000197900 485 ntBASIC16.41■□□□□ 0.22
Scn7aB1AYL1 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn7aB1AYL1 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn7aB1AYL1 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn7aB1AYL1 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms