Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm12887B1AVM1 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Gm12887B1AVM1 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm12887B1AVM1 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
Gm12887B1AVM1 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.54□□□□□ -0.72
Gm12887B1AVM1 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm12887B1AVM1 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Gm12887B1AVM1 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm12887B1AVM1 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
Gm12887B1AVM1 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Gm12887B1AVM1 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm12887B1AVM1 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm12887B1AVM1 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Gm12887B1AVM1 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm12887B1AVM1 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Gm12887B1AVM1 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
Gm12887B1AVM1 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Gm12887B1AVM1 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm12887B1AVM1 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Gm12887B1AVM1 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Gm12887B1AVM1 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC10.54□□□□□ -0.72
Gm12887B1AVM1 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC10.54□□□□□ -0.72
Gm12887B1AVM1 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC10.54□□□□□ -0.72
Gm12887B1AVM1 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC10.54□□□□□ -0.72
Gm12887B1AVM1 Gm45484-201ENSMUST00000210310 1141 ntBASIC10.54□□□□□ -0.72
Gm12887B1AVM1 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC10.54□□□□□ -0.72
Gm12887B1AVM1 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm12887B1AVM1 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Gm12887B1AVM1 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm12887B1AVM1 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC10.54□□□□□ -0.72
Gm12887B1AVM1 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm12887B1AVM1 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Gm12887B1AVM1 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm12887B1AVM1 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm12887B1AVM1 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm12887B1AVM1 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC10.54□□□□□ -0.72
Gm12887B1AVM1 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Gm12887B1AVM1 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Gm12887B1AVM1 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm12887B1AVM1 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm12887B1AVM1 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm12887B1AVM1 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm12887B1AVM1 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Gm12887B1AVM1 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm12887B1AVM1 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm12887B1AVM1 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Gm12887B1AVM1 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm12887B1AVM1 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm12887B1AVM1 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm12887B1AVM1 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Gm12887B1AVM1 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Gm12887B1AVM1 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm12887B1AVM1 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm12887B1AVM1 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC10.53□□□□□ -0.72
Gm12887B1AVM1 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm12887B1AVM1 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Gm12887B1AVM1 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm12887B1AVM1 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm12887B1AVM1 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm12887B1AVM1 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm12887B1AVM1 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Gm12887B1AVM1 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm12887B1AVM1 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Gm12887B1AVM1 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm12887B1AVM1 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Gm12887B1AVM1 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Gm12887B1AVM1 Gm13886-201ENSMUST00000117876 1183 ntBASIC10.53□□□□□ -0.72
Gm12887B1AVM1 Gm15393-201ENSMUST00000120499 219 ntBASIC10.53□□□□□ -0.72
Gm12887B1AVM1 Mir1897-201ENSMUST00000122581 272 ntBASIC10.53□□□□□ -0.72
Gm12887B1AVM1 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC10.53□□□□□ -0.72
Gm12887B1AVM1 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC10.53□□□□□ -0.72
Gm12887B1AVM1 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC10.53□□□□□ -0.72
Gm12887B1AVM1 Gm18889-201ENSMUST00000174284 929 ntBASIC10.53□□□□□ -0.72
Gm12887B1AVM1 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC10.53□□□□□ -0.72
Gm12887B1AVM1 Gm10459-201ENSMUST00000202708 1155 ntBASIC10.53□□□□□ -0.72
Gm12887B1AVM1 AC124549.3-201ENSMUST00000225541 367 ntBASIC10.53□□□□□ -0.72
Gm12887B1AVM1 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm12887B1AVM1 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm12887B1AVM1 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm12887B1AVM1 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Gm12887B1AVM1 Gm37324-201ENSMUST00000194500 4504 ntBASIC10.53□□□□□ -0.72
Gm12887B1AVM1 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Gm12887B1AVM1 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm12887B1AVM1 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
Gm12887B1AVM1 Gm43051-201ENSMUST00000201096 2678 ntBASIC10.53□□□□□ -0.72
Gm12887B1AVM1 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm12887B1AVM1 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm12887B1AVM1 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Gm12887B1AVM1 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Gm12887B1AVM1 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm12887B1AVM1 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC10.53□□□□□ -0.72
Gm12887B1AVM1 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm12887B1AVM1 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Gm12887B1AVM1 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.53□□□□□ -0.72
Gm12887B1AVM1 AC161252.3-201ENSMUST00000225465 1549 ntBASIC10.53□□□□□ -0.72
Gm12887B1AVM1 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm12887B1AVM1 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Gm12887B1AVM1 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Gm12887B1AVM1 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Gm12887B1AVM1 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms