Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn1aA2APX8 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Scn1aA2APX8 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Scn1aA2APX8 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn1aA2APX8 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn1aA2APX8 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn1aA2APX8 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Scn1aA2APX8 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn1aA2APX8 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn1aA2APX8 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn1aA2APX8 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Scn1aA2APX8 Gm10434-201ENSMUST00000101158 471 ntBASIC13.61□□□□□ -0.23
Scn1aA2APX8 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.61□□□□□ -0.23
Scn1aA2APX8 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn1aA2APX8 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Scn1aA2APX8 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.61□□□□□ -0.23
Scn1aA2APX8 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC13.61□□□□□ -0.23
Scn1aA2APX8 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Scn1aA2APX8 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn1aA2APX8 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Scn1aA2APX8 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn1aA2APX8 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn1aA2APX8 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scn1aA2APX8 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Scn1aA2APX8 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn1aA2APX8 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Scn1aA2APX8 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn1aA2APX8 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.6□□□□□ -0.23
Scn1aA2APX8 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn1aA2APX8 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Scn1aA2APX8 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn1aA2APX8 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn1aA2APX8 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Scn1aA2APX8 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.6□□□□□ -0.23
Scn1aA2APX8 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scn1aA2APX8 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.6□□□□□ -0.23
Scn1aA2APX8 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.6□□□□□ -0.23
Scn1aA2APX8 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scn1aA2APX8 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn1aA2APX8 Gm22058-201ENSMUST00000083393 310 ntBASIC13.6□□□□□ -0.23
Scn1aA2APX8 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Scn1aA2APX8 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Scn1aA2APX8 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn1aA2APX8 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Scn1aA2APX8 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn1aA2APX8 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn1aA2APX8 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.6□□□□□ -0.23
Scn1aA2APX8 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn1aA2APX8 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.6□□□□□ -0.23
Scn1aA2APX8 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn1aA2APX8 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn1aA2APX8 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn1aA2APX8 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scn1aA2APX8 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn1aA2APX8 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Scn1aA2APX8 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn1aA2APX8 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.59□□□□□ -0.23
Scn1aA2APX8 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn1aA2APX8 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Scn1aA2APX8 Gm11964-201ENSMUST00000120982 444 ntBASIC13.59□□□□□ -0.23
Scn1aA2APX8 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Scn1aA2APX8 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.59□□□□□ -0.23
Scn1aA2APX8 Gm16296-201ENSMUST00000159905 325 ntBASIC13.59□□□□□ -0.23
Scn1aA2APX8 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn1aA2APX8 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn1aA2APX8 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Scn1aA2APX8 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn1aA2APX8 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Scn1aA2APX8 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn1aA2APX8 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn1aA2APX8 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Scn1aA2APX8 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn1aA2APX8 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn1aA2APX8 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.59□□□□□ -0.23
Scn1aA2APX8 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Scn1aA2APX8 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn1aA2APX8 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn1aA2APX8 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Scn1aA2APX8 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn1aA2APX8 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Scn1aA2APX8 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn1aA2APX8 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn1aA2APX8 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.59□□□□□ -0.23
Scn1aA2APX8 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Scn1aA2APX8 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn1aA2APX8 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn1aA2APX8 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Scn1aA2APX8 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn1aA2APX8 Gm4986-201ENSMUST00000119731 549 ntBASIC13.59□□□□□ -0.23
Scn1aA2APX8 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.59□□□□□ -0.23
Scn1aA2APX8 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.59□□□□□ -0.23
Scn1aA2APX8 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.59□□□□□ -0.23
Scn1aA2APX8 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Scn1aA2APX8 Gm3961-201ENSMUST00000204425 994 ntBASIC13.59□□□□□ -0.23
Scn1aA2APX8 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Scn1aA2APX8 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.59□□□□□ -0.23
Scn1aA2APX8 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.59□□□□□ -0.23
Scn1aA2APX8 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.59□□□□□ -0.23
Scn1aA2APX8 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn1aA2APX8 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms