Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 Mir686-201ENSMUST00000102174 109 ntBASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 Gm11618-201ENSMUST00000117946 267 ntBASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 Gm12537-201ENSMUST00000119266 1002 ntBASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 Gm12070-201ENSMUST00000119551 1002 ntBASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 Gm12671-201ENSMUST00000119978 1002 ntBASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 Gm13292-201ENSMUST00000120014 1000 ntBASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 Gm11793-201ENSMUST00000120433 981 ntBASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 Gm12403-201ENSMUST00000121384 959 ntBASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 Gm25927-201ENSMUST00000175058 117 ntBASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 Gm10359-201ENSMUST00000180167 1002 ntBASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 Gm12033-201ENSMUST00000180654 1002 ntBASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 Gm5559-201ENSMUST00000180755 1002 ntBASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 Gm4335-201ENSMUST00000182581 1004 ntBASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 AC173210.1-201ENSMUST00000222341 1131 ntBASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 Gm24526-201ENSMUST00000082921 158 ntBASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 Gm43364-201ENSMUST00000196046 3274 ntBASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cfap99A0A140LIX9 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cfap99A0A140LIX9 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cfap99A0A140LIX9 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC15.59■□□□□ 0.09
Cfap99A0A140LIX9 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cfap99A0A140LIX9 Gm45242-201ENSMUST00000210666 2129 ntBASIC15.59■□□□□ 0.09
Cfap99A0A140LIX9 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC15.59■□□□□ 0.09
Cfap99A0A140LIX9 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cfap99A0A140LIX9 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cfap99A0A140LIX9 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cfap99A0A140LIX9 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cfap99A0A140LIX9 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC15.59■□□□□ 0.09
Cfap99A0A140LIX9 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cfap99A0A140LIX9 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Cfap99A0A140LIX9 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC15.59■□□□□ 0.09
Cfap99A0A140LIX9 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cfap99A0A140LIX9 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cfap99A0A140LIX9 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC15.59■□□□□ 0.09
Cfap99A0A140LIX9 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC15.59■□□□□ 0.09
Cfap99A0A140LIX9 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cfap99A0A140LIX9 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC15.59■□□□□ 0.09
Cfap99A0A140LIX9 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC15.59■□□□□ 0.09
Cfap99A0A140LIX9 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC15.59■□□□□ 0.09
Cfap99A0A140LIX9 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cfap99A0A140LIX9 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cfap99A0A140LIX9 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cfap99A0A140LIX9 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cfap99A0A140LIX9 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cfap99A0A140LIX9 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cfap99A0A140LIX9 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cfap99A0A140LIX9 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC15.59■□□□□ 0.09
Cfap99A0A140LIX9 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cfap99A0A140LIX9 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cfap99A0A140LIX9 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cfap99A0A140LIX9 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cfap99A0A140LIX9 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Cfap99A0A140LIX9 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cfap99A0A140LIX9 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cfap99A0A140LIX9 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
Cfap99A0A140LIX9 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cfap99A0A140LIX9 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Cfap99A0A140LIX9 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cfap99A0A140LIX9 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Cfap99A0A140LIX9 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cfap99A0A140LIX9 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cfap99A0A140LIX9 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC15.58■□□□□ 0.08
Cfap99A0A140LIX9 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cfap99A0A140LIX9 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cfap99A0A140LIX9 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Cfap99A0A140LIX9 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cfap99A0A140LIX9 Gm13886-201ENSMUST00000117876 1183 ntBASIC15.58■□□□□ 0.08
Cfap99A0A140LIX9 Gm12241-201ENSMUST00000118330 726 ntBASIC15.58■□□□□ 0.08
Cfap99A0A140LIX9 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC15.58■□□□□ 0.08
Cfap99A0A140LIX9 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cfap99A0A140LIX9 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cfap99A0A140LIX9 Mir3102-201ENSMUST00000175555 104 ntBASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms