Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trbv29A0A0G2LB96 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trbv29A0A0G2LB96 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trbv29A0A0G2LB96 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trbv29A0A0G2LB96 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trbv29A0A0G2LB96 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trbv29A0A0G2LB96 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trbv29A0A0G2LB96 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trbv29A0A0G2LB96 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trbv29A0A0G2LB96 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC10.84□□□□□ -0.67
Trbv29A0A0G2LB96 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trbv29A0A0G2LB96 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Trbv29A0A0G2LB96 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trbv29A0A0G2LB96 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trbv29A0A0G2LB96 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trbv29A0A0G2LB96 Gm23935-201ENSMUST00000102303 57 ntBASIC10.84□□□□□ -0.67
Trbv29A0A0G2LB96 Gm24270-201ENSMUST00000102326 57 ntBASIC10.84□□□□□ -0.67
Trbv29A0A0G2LB96 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC10.84□□□□□ -0.67
Trbv29A0A0G2LB96 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC10.84□□□□□ -0.67
Trbv29A0A0G2LB96 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC10.84□□□□□ -0.67
Trbv29A0A0G2LB96 Gm24245-201ENSMUST00000157318 57 ntBASIC10.84□□□□□ -0.67
Trbv29A0A0G2LB96 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC10.84□□□□□ -0.67
Trbv29A0A0G2LB96 Gm21854-201ENSMUST00000179901 471 ntBASIC10.84□□□□□ -0.67
Trbv29A0A0G2LB96 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC10.84□□□□□ -0.67
Trbv29A0A0G2LB96 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
Trbv29A0A0G2LB96 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trbv29A0A0G2LB96 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trbv29A0A0G2LB96 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trbv29A0A0G2LB96 Gm21038-201ENSMUST00000222205 1383 ntBASIC10.84□□□□□ -0.67
Trbv29A0A0G2LB96 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC10.84□□□□□ -0.67
Trbv29A0A0G2LB96 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trbv29A0A0G2LB96 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trbv29A0A0G2LB96 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trbv29A0A0G2LB96 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trbv29A0A0G2LB96 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trbv29A0A0G2LB96 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trbv29A0A0G2LB96 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trbv29A0A0G2LB96 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trbv29A0A0G2LB96 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trbv29A0A0G2LB96 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trbv29A0A0G2LB96 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trbv29A0A0G2LB96 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC10.84□□□□□ -0.67
Trbv29A0A0G2LB96 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trbv29A0A0G2LB96 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trbv29A0A0G2LB96 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trbv29A0A0G2LB96 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trbv29A0A0G2LB96 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trbv29A0A0G2LB96 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trbv29A0A0G2LB96 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trbv29A0A0G2LB96 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trbv29A0A0G2LB96 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trbv29A0A0G2LB96 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trbv29A0A0G2LB96 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trbv29A0A0G2LB96 Gm45266-201ENSMUST00000210111 2173 ntBASIC10.83□□□□□ -0.68
Trbv29A0A0G2LB96 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trbv29A0A0G2LB96 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trbv29A0A0G2LB96 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trbv29A0A0G2LB96 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trbv29A0A0G2LB96 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Trbv29A0A0G2LB96 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trbv29A0A0G2LB96 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trbv29A0A0G2LB96 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC10.83□□□□□ -0.68
Trbv29A0A0G2LB96 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC10.83□□□□□ -0.68
Trbv29A0A0G2LB96 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trbv29A0A0G2LB96 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trbv29A0A0G2LB96 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC10.83□□□□□ -0.68
Trbv29A0A0G2LB96 Gm37171-201ENSMUST00000192636 1185 ntBASIC10.83□□□□□ -0.68
Trbv29A0A0G2LB96 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC10.83□□□□□ -0.68
Trbv29A0A0G2LB96 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC10.83□□□□□ -0.68
Trbv29A0A0G2LB96 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC10.83□□□□□ -0.68
Trbv29A0A0G2LB96 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trbv29A0A0G2LB96 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trbv29A0A0G2LB96 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trbv29A0A0G2LB96 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trbv29A0A0G2LB96 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trbv29A0A0G2LB96 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trbv29A0A0G2LB96 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trbv29A0A0G2LB96 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trbv29A0A0G2LB96 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trbv29A0A0G2LB96 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trbv29A0A0G2LB96 Gm15222-202ENSMUST00000228667 1726 ntBASIC10.83□□□□□ -0.68
Trbv29A0A0G2LB96 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trbv29A0A0G2LB96 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trbv29A0A0G2LB96 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trbv29A0A0G2LB96 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trbv29A0A0G2LB96 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trbv29A0A0G2LB96 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trbv29A0A0G2LB96 AC159195.1-201ENSMUST00000225867 2086 ntBASIC10.83□□□□□ -0.68
Trbv29A0A0G2LB96 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trbv29A0A0G2LB96 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trbv29A0A0G2LB96 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trbv29A0A0G2LB96 AC159621.2-201ENSMUST00000223519 1326 ntBASIC10.83□□□□□ -0.68
Trbv29A0A0G2LB96 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trbv29A0A0G2LB96 AC164702.1-201ENSMUST00000220135 2212 ntBASIC10.82□□□□□ -0.68
Trbv29A0A0G2LB96 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trbv29A0A0G2LB96 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Trbv29A0A0G2LB96 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trbv29A0A0G2LB96 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trbv29A0A0G2LB96 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trbv29A0A0G2LB96 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms