Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 Gm4204-201ENSMUST00000110798 1231 ntBASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 Gm2445-201ENSMUST00000182798 989 ntBASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 Gm27321-201ENSMUST00000185021 205 ntBASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 Rbfox2-208ENSMUST00000227930 1218 ntBASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 AC154806.6-201ENSMUST00000228192 202 ntBASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 CT573086.2-201ENSMUST00000227277 4992 ntBASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 AC122314.1-201ENSMUST00000223056 2239 ntBASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 Gm43102-201ENSMUST00000201004 2324 ntBASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 Gm15460-201ENSMUST00000118147 391 ntBASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 Gm7820-201ENSMUST00000121012 1052 ntBASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 Gm27989-201ENSMUST00000184721 107 ntBASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 Gm38114-201ENSMUST00000191877 1232 ntBASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 AC153872.1-201ENSMUST00000199539 128 ntBASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 Gm18027-201ENSMUST00000218947 619 ntBASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav6n-6A0A075B6B2 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms