Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav18A0A075B656 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav18A0A075B656 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Trav18A0A075B656 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav18A0A075B656 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav18A0A075B656 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav18A0A075B656 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Trav18A0A075B656 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Trav18A0A075B656 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav18A0A075B656 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Trav18A0A075B656 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav18A0A075B656 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav18A0A075B656 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav18A0A075B656 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav18A0A075B656 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav18A0A075B656 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav18A0A075B656 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav18A0A075B656 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav18A0A075B656 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Trav18A0A075B656 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav18A0A075B656 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav18A0A075B656 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Trav18A0A075B656 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC10.7□□□□□ -0.7
Trav18A0A075B656 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav18A0A075B656 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav18A0A075B656 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav18A0A075B656 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav18A0A075B656 AC117194.1-201ENSMUST00000224847 3002 ntBASIC10.7□□□□□ -0.7
Trav18A0A075B656 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav18A0A075B656 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav18A0A075B656 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav18A0A075B656 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Trav18A0A075B656 Gm22189-201ENSMUST00000103822 86 ntBASIC10.7□□□□□ -0.7
Trav18A0A075B656 Gm6447-201ENSMUST00000118905 835 ntBASIC10.7□□□□□ -0.7
Trav18A0A075B656 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC10.7□□□□□ -0.7
Trav18A0A075B656 Gm12416-201ENSMUST00000120911 1008 ntBASIC10.7□□□□□ -0.7
Trav18A0A075B656 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC10.7□□□□□ -0.7
Trav18A0A075B656 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav18A0A075B656 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav18A0A075B656 Gm31326-201ENSMUST00000191856 1048 ntBASIC10.7□□□□□ -0.7
Trav18A0A075B656 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav18A0A075B656 Gm7730-201ENSMUST00000212486 454 ntBASIC10.7□□□□□ -0.7
Trav18A0A075B656 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC10.7□□□□□ -0.7
Trav18A0A075B656 AC093022.5-201ENSMUST00000226841 1079 ntBASIC10.7□□□□□ -0.7
Trav18A0A075B656 Rn7sk-201ENSMUST00000083103 331 ntBASIC10.7□□□□□ -0.7
Trav18A0A075B656 Gm26315-201ENSMUST00000083890 321 ntBASIC10.7□□□□□ -0.7
Trav18A0A075B656 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav18A0A075B656 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav18A0A075B656 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav18A0A075B656 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Trav18A0A075B656 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav18A0A075B656 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav18A0A075B656 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.7□□□□□ -0.7
Trav18A0A075B656 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav18A0A075B656 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav18A0A075B656 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav18A0A075B656 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav18A0A075B656 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav18A0A075B656 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Trav18A0A075B656 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav18A0A075B656 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav18A0A075B656 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav18A0A075B656 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav18A0A075B656 Gm10040-201ENSMUST00000080726 1662 ntBASIC10.69□□□□□ -0.7
Trav18A0A075B656 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
Trav18A0A075B656 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Trav18A0A075B656 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav18A0A075B656 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Trav18A0A075B656 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav18A0A075B656 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav18A0A075B656 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav18A0A075B656 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav18A0A075B656 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav18A0A075B656 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav18A0A075B656 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Trav18A0A075B656 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav18A0A075B656 AC096628.2-201ENSMUST00000225443 1413 ntBASIC10.69□□□□□ -0.7
Trav18A0A075B656 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav18A0A075B656 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav18A0A075B656 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav18A0A075B656 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav18A0A075B656 Syt7-204ENSMUST00000223586 1344 ntBASIC10.69□□□□□ -0.7
Trav18A0A075B656 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav18A0A075B656 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav18A0A075B656 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav18A0A075B656 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Trav18A0A075B656 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav18A0A075B656 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav18A0A075B656 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav18A0A075B656 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav18A0A075B656 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC10.69□□□□□ -0.7
Trav18A0A075B656 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav18A0A075B656 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Trav18A0A075B656 Gm45195-201ENSMUST00000205597 1008 ntBASIC10.69□□□□□ -0.7
Trav18A0A075B656 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav18A0A075B656 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav18A0A075B656 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav18A0A075B656 AC192088.1-201ENSMUST00000227561 301 ntBASIC10.69□□□□□ -0.7
Trav18A0A075B656 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Trav18A0A075B656 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms