Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
H2afb2S4R1M3 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb2S4R1M3 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb2S4R1M3 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb2S4R1M3 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb2S4R1M3 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb2S4R1M3 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
H2afb2S4R1M3 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb2S4R1M3 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb2S4R1M3 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb2S4R1M3 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb2S4R1M3 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
H2afb2S4R1M3 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb2S4R1M3 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb2S4R1M3 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb2S4R1M3 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.07□□□□□ -0.32
H2afb2S4R1M3 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb2S4R1M3 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
H2afb2S4R1M3 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.07□□□□□ -0.32
H2afb2S4R1M3 Gm6745-201ENSMUST00000199216 526 ntBASIC13.07□□□□□ -0.32
H2afb2S4R1M3 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb2S4R1M3 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb2S4R1M3 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
H2afb2S4R1M3 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb2S4R1M3 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb2S4R1M3 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb2S4R1M3 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb2S4R1M3 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb2S4R1M3 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb2S4R1M3 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb2S4R1M3 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.07□□□□□ -0.32
H2afb2S4R1M3 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb2S4R1M3 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb2S4R1M3 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
H2afb2S4R1M3 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
H2afb2S4R1M3 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb2S4R1M3 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb2S4R1M3 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.07□□□□□ -0.32
H2afb2S4R1M3 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb2S4R1M3 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
H2afb2S4R1M3 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
H2afb2S4R1M3 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb2S4R1M3 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb2S4R1M3 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb2S4R1M3 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.06□□□□□ -0.32
H2afb2S4R1M3 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb2S4R1M3 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb2S4R1M3 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
H2afb2S4R1M3 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb2S4R1M3 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb2S4R1M3 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb2S4R1M3 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb2S4R1M3 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
H2afb2S4R1M3 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.06□□□□□ -0.32
H2afb2S4R1M3 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb2S4R1M3 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb2S4R1M3 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb2S4R1M3 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.06□□□□□ -0.32
H2afb2S4R1M3 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
H2afb2S4R1M3 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb2S4R1M3 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb2S4R1M3 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb2S4R1M3 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb2S4R1M3 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb2S4R1M3 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb2S4R1M3 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb2S4R1M3 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb2S4R1M3 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb2S4R1M3 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb2S4R1M3 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
H2afb2S4R1M3 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
H2afb2S4R1M3 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
H2afb2S4R1M3 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
H2afb2S4R1M3 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
H2afb2S4R1M3 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
H2afb2S4R1M3 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
H2afb2S4R1M3 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
H2afb2S4R1M3 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
H2afb2S4R1M3 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
H2afb2S4R1M3 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
H2afb2S4R1M3 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
H2afb2S4R1M3 Gm13612-201ENSMUST00000119276 390 ntBASIC13.05□□□□□ -0.32
H2afb2S4R1M3 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
H2afb2S4R1M3 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.05□□□□□ -0.32
H2afb2S4R1M3 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.05□□□□□ -0.32
H2afb2S4R1M3 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
H2afb2S4R1M3 Gm7287-201ENSMUST00000205267 602 ntBASIC13.05□□□□□ -0.32
H2afb2S4R1M3 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.05□□□□□ -0.32
H2afb2S4R1M3 Gm6458-201ENSMUST00000211573 635 ntBASIC13.05□□□□□ -0.32
H2afb2S4R1M3 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
H2afb2S4R1M3 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
H2afb2S4R1M3 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
H2afb2S4R1M3 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
H2afb2S4R1M3 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
H2afb2S4R1M3 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
H2afb2S4R1M3 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
H2afb2S4R1M3 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
H2afb2S4R1M3 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.05□□□□□ -0.32
H2afb2S4R1M3 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
H2afb2S4R1M3 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms