Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lhx9Q9WUH2 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lhx9Q9WUH2 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lhx9Q9WUH2 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lhx9Q9WUH2 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Lhx9Q9WUH2 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lhx9Q9WUH2 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Lhx9Q9WUH2 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lhx9Q9WUH2 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lhx9Q9WUH2 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lhx9Q9WUH2 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.42□□□□□ -0.42
Lhx9Q9WUH2 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lhx9Q9WUH2 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lhx9Q9WUH2 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lhx9Q9WUH2 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lhx9Q9WUH2 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lhx9Q9WUH2 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Lhx9Q9WUH2 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.42□□□□□ -0.42
Lhx9Q9WUH2 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lhx9Q9WUH2 Gm16202-201ENSMUST00000117532 544 ntBASIC12.42□□□□□ -0.42
Lhx9Q9WUH2 Gm13123-201ENSMUST00000122173 492 ntBASIC12.42□□□□□ -0.42
Lhx9Q9WUH2 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.42□□□□□ -0.42
Lhx9Q9WUH2 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Lhx9Q9WUH2 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.42□□□□□ -0.42
Lhx9Q9WUH2 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lhx9Q9WUH2 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
Lhx9Q9WUH2 Gm7029-201ENSMUST00000173226 450 ntBASIC12.42□□□□□ -0.42
Lhx9Q9WUH2 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.42□□□□□ -0.42
Lhx9Q9WUH2 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.42□□□□□ -0.42
Lhx9Q9WUH2 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lhx9Q9WUH2 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lhx9Q9WUH2 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lhx9Q9WUH2 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.42□□□□□ -0.42
Lhx9Q9WUH2 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.42□□□□□ -0.42
Lhx9Q9WUH2 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lhx9Q9WUH2 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lhx9Q9WUH2 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Lhx9Q9WUH2 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lhx9Q9WUH2 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lhx9Q9WUH2 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lhx9Q9WUH2 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lhx9Q9WUH2 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.42□□□□□ -0.42
Lhx9Q9WUH2 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.42□□□□□ -0.42
Lhx9Q9WUH2 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lhx9Q9WUH2 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lhx9Q9WUH2 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Lhx9Q9WUH2 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Lhx9Q9WUH2 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.41□□□□□ -0.42
Lhx9Q9WUH2 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lhx9Q9WUH2 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.41□□□□□ -0.42
Lhx9Q9WUH2 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lhx9Q9WUH2 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lhx9Q9WUH2 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lhx9Q9WUH2 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lhx9Q9WUH2 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Lhx9Q9WUH2 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lhx9Q9WUH2 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lhx9Q9WUH2 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.41□□□□□ -0.42
Lhx9Q9WUH2 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.41□□□□□ -0.42
Lhx9Q9WUH2 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lhx9Q9WUH2 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.41□□□□□ -0.42
Lhx9Q9WUH2 Gm42627-201ENSMUST00000197347 224 ntBASIC12.41□□□□□ -0.42
Lhx9Q9WUH2 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Lhx9Q9WUH2 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lhx9Q9WUH2 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Lhx9Q9WUH2 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.41□□□□□ -0.42
Lhx9Q9WUH2 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lhx9Q9WUH2 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lhx9Q9WUH2 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lhx9Q9WUH2 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Lhx9Q9WUH2 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lhx9Q9WUH2 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Lhx9Q9WUH2 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Lhx9Q9WUH2 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lhx9Q9WUH2 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.41□□□□□ -0.42
Lhx9Q9WUH2 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.41□□□□□ -0.42
Lhx9Q9WUH2 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lhx9Q9WUH2 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.41□□□□□ -0.42
Lhx9Q9WUH2 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lhx9Q9WUH2 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lhx9Q9WUH2 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lhx9Q9WUH2 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lhx9Q9WUH2 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lhx9Q9WUH2 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lhx9Q9WUH2 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.41□□□□□ -0.42
Lhx9Q9WUH2 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx9Q9WUH2 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.4□□□□□ -0.42
Lhx9Q9WUH2 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx9Q9WUH2 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx9Q9WUH2 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx9Q9WUH2 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx9Q9WUH2 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx9Q9WUH2 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx9Q9WUH2 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.4□□□□□ -0.42
Lhx9Q9WUH2 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.4□□□□□ -0.42
Lhx9Q9WUH2 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx9Q9WUH2 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.4□□□□□ -0.42
Lhx9Q9WUH2 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.4□□□□□ -0.42
Lhx9Q9WUH2 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.4□□□□□ -0.42
Lhx9Q9WUH2 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms