Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
CcsQ9WU84 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
CcsQ9WU84 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
CcsQ9WU84 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
CcsQ9WU84 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CcsQ9WU84 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CcsQ9WU84 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CcsQ9WU84 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CcsQ9WU84 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
CcsQ9WU84 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
CcsQ9WU84 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
CcsQ9WU84 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CcsQ9WU84 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
CcsQ9WU84 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
CcsQ9WU84 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CcsQ9WU84 Gm6756-201ENSMUST00000180647 1620 ntBASIC10.18□□□□□ -0.78
CcsQ9WU84 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
CcsQ9WU84 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CcsQ9WU84 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC10.18□□□□□ -0.78
CcsQ9WU84 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CcsQ9WU84 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
CcsQ9WU84 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC10.17□□□□□ -0.78
CcsQ9WU84 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CcsQ9WU84 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
CcsQ9WU84 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
CcsQ9WU84 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
CcsQ9WU84 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CcsQ9WU84 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CcsQ9WU84 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
CcsQ9WU84 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CcsQ9WU84 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
CcsQ9WU84 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
CcsQ9WU84 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
CcsQ9WU84 Gm43102-201ENSMUST00000201004 2324 ntBASIC10.17□□□□□ -0.78
CcsQ9WU84 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
CcsQ9WU84 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
CcsQ9WU84 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
CcsQ9WU84 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CcsQ9WU84 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
CcsQ9WU84 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CcsQ9WU84 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
CcsQ9WU84 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.17□□□□□ -0.78
CcsQ9WU84 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CcsQ9WU84 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CcsQ9WU84 Gm13453-201ENSMUST00000118708 357 ntBASIC10.17□□□□□ -0.78
CcsQ9WU84 Gm13823-201ENSMUST00000119930 345 ntBASIC10.17□□□□□ -0.78
CcsQ9WU84 Gm14057-201ENSMUST00000120631 482 ntBASIC10.17□□□□□ -0.78
CcsQ9WU84 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC10.17□□□□□ -0.78
CcsQ9WU84 Gm9719-201ENSMUST00000162765 543 ntBASIC10.17□□□□□ -0.78
CcsQ9WU84 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC10.17□□□□□ -0.78
CcsQ9WU84 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CcsQ9WU84 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CcsQ9WU84 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC10.17□□□□□ -0.78
CcsQ9WU84 Gm27618-201ENSMUST00000183671 60 ntBASIC10.17□□□□□ -0.78
CcsQ9WU84 AC102291.3-201ENSMUST00000226566 405 ntBASIC10.17□□□□□ -0.78
CcsQ9WU84 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
CcsQ9WU84 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
CcsQ9WU84 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CcsQ9WU84 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
CcsQ9WU84 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CcsQ9WU84 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
CcsQ9WU84 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CcsQ9WU84 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
CcsQ9WU84 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
CcsQ9WU84 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CcsQ9WU84 Gm9252-201ENSMUST00000172364 1602 ntBASIC10.17□□□□□ -0.78
CcsQ9WU84 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CcsQ9WU84 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
CcsQ9WU84 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
CcsQ9WU84 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
CcsQ9WU84 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
CcsQ9WU84 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CcsQ9WU84 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
CcsQ9WU84 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC10.17□□□□□ -0.78
CcsQ9WU84 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
CcsQ9WU84 Syt7-205ENSMUST00000224135 1557 ntBASIC10.17□□□□□ -0.78
CcsQ9WU84 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
CcsQ9WU84 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CcsQ9WU84 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.17□□□□□ -0.78
CcsQ9WU84 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CcsQ9WU84 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CcsQ9WU84 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CcsQ9WU84 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CcsQ9WU84 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CcsQ9WU84 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
CcsQ9WU84 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CcsQ9WU84 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
CcsQ9WU84 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CcsQ9WU84 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CcsQ9WU84 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
CcsQ9WU84 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC10.16□□□□□ -0.78
CcsQ9WU84 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CcsQ9WU84 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CcsQ9WU84 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CcsQ9WU84 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CcsQ9WU84 Gm43417-201ENSMUST00000201586 5207 ntBASIC10.16□□□□□ -0.78
CcsQ9WU84 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CcsQ9WU84 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CcsQ9WU84 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CcsQ9WU84 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms