Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Nkx2-4Q9EQM3 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx2-4Q9EQM3 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx2-4Q9EQM3 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx2-4Q9EQM3 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx2-4Q9EQM3 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx2-4Q9EQM3 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.35□□□□□ -0.27
Nkx2-4Q9EQM3 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx2-4Q9EQM3 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx2-4Q9EQM3 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Nkx2-4Q9EQM3 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx2-4Q9EQM3 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx2-4Q9EQM3 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx2-4Q9EQM3 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx2-4Q9EQM3 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx2-4Q9EQM3 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx2-4Q9EQM3 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx2-4Q9EQM3 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx2-4Q9EQM3 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Nkx2-4Q9EQM3 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx2-4Q9EQM3 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx2-4Q9EQM3 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx2-4Q9EQM3 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx2-4Q9EQM3 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx2-4Q9EQM3 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Nkx2-4Q9EQM3 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC13.34□□□□□ -0.27
Nkx2-4Q9EQM3 Gm15432-201ENSMUST00000121106 195 ntBASIC13.34□□□□□ -0.27
Nkx2-4Q9EQM3 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC13.34□□□□□ -0.27
Nkx2-4Q9EQM3 Gm16397-201ENSMUST00000122201 494 ntBASIC13.34□□□□□ -0.27
Nkx2-4Q9EQM3 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx2-4Q9EQM3 Gm8194-201ENSMUST00000159783 859 ntBASIC13.34□□□□□ -0.27
Nkx2-4Q9EQM3 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC13.34□□□□□ -0.27
Nkx2-4Q9EQM3 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC13.34□□□□□ -0.27
Nkx2-4Q9EQM3 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.34□□□□□ -0.27
Nkx2-4Q9EQM3 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC13.34□□□□□ -0.27
Nkx2-4Q9EQM3 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC13.34□□□□□ -0.27
Nkx2-4Q9EQM3 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx2-4Q9EQM3 AC135469.1-201ENSMUST00000225984 772 ntBASIC13.34□□□□□ -0.27
Nkx2-4Q9EQM3 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx2-4Q9EQM3 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx2-4Q9EQM3 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx2-4Q9EQM3 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx2-4Q9EQM3 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx2-4Q9EQM3 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx2-4Q9EQM3 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx2-4Q9EQM3 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.34□□□□□ -0.27
Nkx2-4Q9EQM3 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx2-4Q9EQM3 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx2-4Q9EQM3 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx2-4Q9EQM3 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx2-4Q9EQM3 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx2-4Q9EQM3 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx2-4Q9EQM3 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Nkx2-4Q9EQM3 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.34□□□□□ -0.27
Nkx2-4Q9EQM3 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nkx2-4Q9EQM3 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Nkx2-4Q9EQM3 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx2-4Q9EQM3 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.33□□□□□ -0.28
Nkx2-4Q9EQM3 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx2-4Q9EQM3 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx2-4Q9EQM3 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx2-4Q9EQM3 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx2-4Q9EQM3 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx2-4Q9EQM3 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx2-4Q9EQM3 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx2-4Q9EQM3 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx2-4Q9EQM3 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx2-4Q9EQM3 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC13.33□□□□□ -0.28
Nkx2-4Q9EQM3 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx2-4Q9EQM3 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx2-4Q9EQM3 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC13.33□□□□□ -0.28
Nkx2-4Q9EQM3 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx2-4Q9EQM3 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Nkx2-4Q9EQM3 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC13.33□□□□□ -0.28
Nkx2-4Q9EQM3 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC13.33□□□□□ -0.28
Nkx2-4Q9EQM3 Gm8285-201ENSMUST00000208293 759 ntBASIC13.33□□□□□ -0.28
Nkx2-4Q9EQM3 Aprt-ps-201ENSMUST00000212311 505 ntBASIC13.33□□□□□ -0.28
Nkx2-4Q9EQM3 AC166344.1-202ENSMUST00000224139 234 ntBASIC13.33□□□□□ -0.28
Nkx2-4Q9EQM3 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx2-4Q9EQM3 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Nkx2-4Q9EQM3 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx2-4Q9EQM3 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Nkx2-4Q9EQM3 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.33□□□□□ -0.28
Nkx2-4Q9EQM3 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx2-4Q9EQM3 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx2-4Q9EQM3 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx2-4Q9EQM3 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx2-4Q9EQM3 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.33□□□□□ -0.28
Nkx2-4Q9EQM3 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.33□□□□□ -0.28
Nkx2-4Q9EQM3 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx2-4Q9EQM3 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx2-4Q9EQM3 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx2-4Q9EQM3 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx2-4Q9EQM3 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx2-4Q9EQM3 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx2-4Q9EQM3 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Nkx2-4Q9EQM3 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx2-4Q9EQM3 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx2-4Q9EQM3 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
Nkx2-4Q9EQM3 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms