Protein–RNA interactions for Protein: Q9DBU5

Rnf6, E3 ubiquitin-protein ligase RNF6, mousemouse

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf6Q9DBU5 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf6Q9DBU5 Gm10012-201ENSMUST00000078252 192 ntBASIC14.03□□□□□ -0.16
Rnf6Q9DBU5 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf6Q9DBU5 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf6Q9DBU5 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.03□□□□□ -0.16
Rnf6Q9DBU5 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Rnf6Q9DBU5 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf6Q9DBU5 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf6Q9DBU5 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf6Q9DBU5 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf6Q9DBU5 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf6Q9DBU5 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf6Q9DBU5 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf6Q9DBU5 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf6Q9DBU5 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf6Q9DBU5 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Rnf6Q9DBU5 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Rnf6Q9DBU5 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf6Q9DBU5 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf6Q9DBU5 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Rnf6Q9DBU5 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf6Q9DBU5 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf6Q9DBU5 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf6Q9DBU5 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Rnf6Q9DBU5 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf6Q9DBU5 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf6Q9DBU5 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Rnf6Q9DBU5 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf6Q9DBU5 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf6Q9DBU5 Gm11803-201ENSMUST00000119966 444 ntBASIC14.02□□□□□ -0.17
Rnf6Q9DBU5 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf6Q9DBU5 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Rnf6Q9DBU5 Gm24196-201ENSMUST00000179161 110 ntBASIC14.02□□□□□ -0.17
Rnf6Q9DBU5 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf6Q9DBU5 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf6Q9DBU5 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf6Q9DBU5 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf6Q9DBU5 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Rnf6Q9DBU5 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf6Q9DBU5 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf6Q9DBU5 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf6Q9DBU5 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf6Q9DBU5 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf6Q9DBU5 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf6Q9DBU5 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf6Q9DBU5 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf6Q9DBU5 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf6Q9DBU5 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf6Q9DBU5 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf6Q9DBU5 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf6Q9DBU5 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf6Q9DBU5 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf6Q9DBU5 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf6Q9DBU5 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf6Q9DBU5 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.01□□□□□ -0.17
Rnf6Q9DBU5 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf6Q9DBU5 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf6Q9DBU5 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf6Q9DBU5 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf6Q9DBU5 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Rnf6Q9DBU5 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf6Q9DBU5 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rnf6Q9DBU5 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf6Q9DBU5 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Rnf6Q9DBU5 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf6Q9DBU5 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.01□□□□□ -0.17
Rnf6Q9DBU5 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC14.01□□□□□ -0.17
Rnf6Q9DBU5 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf6Q9DBU5 Gm12539-201ENSMUST00000121549 1098 ntBASIC14.01□□□□□ -0.17
Rnf6Q9DBU5 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.01□□□□□ -0.17
Rnf6Q9DBU5 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.01□□□□□ -0.17
Rnf6Q9DBU5 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.01□□□□□ -0.17
Rnf6Q9DBU5 Gm8810-201ENSMUST00000172895 754 ntBASIC14.01□□□□□ -0.17
Rnf6Q9DBU5 Gm27486-201ENSMUST00000184923 80 ntBASIC14.01□□□□□ -0.17
Rnf6Q9DBU5 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf6Q9DBU5 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf6Q9DBU5 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf6Q9DBU5 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf6Q9DBU5 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf6Q9DBU5 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf6Q9DBU5 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf6Q9DBU5 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf6Q9DBU5 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf6Q9DBU5 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf6Q9DBU5 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf6Q9DBU5 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.01□□□□□ -0.17
Rnf6Q9DBU5 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf6Q9DBU5 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Rnf6Q9DBU5 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf6Q9DBU5 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf6Q9DBU5 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf6Q9DBU5 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf6Q9DBU5 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf6Q9DBU5 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf6Q9DBU5 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf6Q9DBU5 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf6Q9DBU5 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf6Q9DBU5 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC14□□□□□ -0.17
Rnf6Q9DBU5 Gm11478-201ENSMUST00000117851 599 ntBASIC14□□□□□ -0.17
Rnf6Q9DBU5 Gm13123-201ENSMUST00000122173 492 ntBASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms