Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp8Q9DB85 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.79□□□□□ -0.36
Rrp8Q9DB85 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Rrp8Q9DB85 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.79□□□□□ -0.36
Rrp8Q9DB85 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.79□□□□□ -0.36
Rrp8Q9DB85 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Rrp8Q9DB85 Gm16505-201ENSMUST00000179981 232 ntBASIC12.79□□□□□ -0.36
Rrp8Q9DB85 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.79□□□□□ -0.36
Rrp8Q9DB85 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp8Q9DB85 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.79□□□□□ -0.36
Rrp8Q9DB85 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp8Q9DB85 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.79□□□□□ -0.36
Rrp8Q9DB85 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.79□□□□□ -0.36
Rrp8Q9DB85 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.79□□□□□ -0.36
Rrp8Q9DB85 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp8Q9DB85 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.79□□□□□ -0.36
Rrp8Q9DB85 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.79□□□□□ -0.36
Rrp8Q9DB85 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp8Q9DB85 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Rrp8Q9DB85 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp8Q9DB85 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp8Q9DB85 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp8Q9DB85 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp8Q9DB85 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp8Q9DB85 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.79□□□□□ -0.36
Rrp8Q9DB85 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.79□□□□□ -0.36
Rrp8Q9DB85 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp8Q9DB85 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp8Q9DB85 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp8Q9DB85 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.79□□□□□ -0.36
Rrp8Q9DB85 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp8Q9DB85 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rrp8Q9DB85 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rrp8Q9DB85 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rrp8Q9DB85 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rrp8Q9DB85 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rrp8Q9DB85 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rrp8Q9DB85 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rrp8Q9DB85 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rrp8Q9DB85 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.78□□□□□ -0.36
Rrp8Q9DB85 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rrp8Q9DB85 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.78□□□□□ -0.36
Rrp8Q9DB85 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rrp8Q9DB85 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rrp8Q9DB85 Mir3547-201ENSMUST00000175461 88 ntBASIC12.78□□□□□ -0.36
Rrp8Q9DB85 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.78□□□□□ -0.36
Rrp8Q9DB85 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.78□□□□□ -0.36
Rrp8Q9DB85 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.78□□□□□ -0.36
Rrp8Q9DB85 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.78□□□□□ -0.36
Rrp8Q9DB85 Gm32025-201ENSMUST00000217960 307 ntBASIC12.78□□□□□ -0.36
Rrp8Q9DB85 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.78□□□□□ -0.36
Rrp8Q9DB85 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rrp8Q9DB85 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rrp8Q9DB85 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rrp8Q9DB85 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.78□□□□□ -0.36
Rrp8Q9DB85 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rrp8Q9DB85 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rrp8Q9DB85 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.78□□□□□ -0.36
Rrp8Q9DB85 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rrp8Q9DB85 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rrp8Q9DB85 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Rrp8Q9DB85 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rrp8Q9DB85 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rrp8Q9DB85 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Rrp8Q9DB85 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Rrp8Q9DB85 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Rrp8Q9DB85 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Rrp8Q9DB85 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Rrp8Q9DB85 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rrp8Q9DB85 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Rrp8Q9DB85 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rrp8Q9DB85 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Rrp8Q9DB85 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.77□□□□□ -0.36
Rrp8Q9DB85 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rrp8Q9DB85 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Rrp8Q9DB85 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Rrp8Q9DB85 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Rrp8Q9DB85 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Rrp8Q9DB85 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rrp8Q9DB85 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rrp8Q9DB85 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rrp8Q9DB85 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rrp8Q9DB85 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rrp8Q9DB85 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rrp8Q9DB85 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rrp8Q9DB85 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rrp8Q9DB85 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rrp8Q9DB85 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.77□□□□□ -0.37
Rrp8Q9DB85 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rrp8Q9DB85 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rrp8Q9DB85 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rrp8Q9DB85 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rrp8Q9DB85 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rrp8Q9DB85 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.77□□□□□ -0.37
Rrp8Q9DB85 Gm18212-201ENSMUST00000211678 889 ntBASIC12.77□□□□□ -0.37
Rrp8Q9DB85 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.77□□□□□ -0.37
Rrp8Q9DB85 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.77□□□□□ -0.37
Rrp8Q9DB85 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Rrp8Q9DB85 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.77□□□□□ -0.37
Rrp8Q9DB85 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms