Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Gm45880-201ENSMUST00000213041 853 ntBASIC17.17■□□□□ 0.34
U2af1Q9D883 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
U2af1Q9D883 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
U2af1Q9D883 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
U2af1Q9D883 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
U2af1Q9D883 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
U2af1Q9D883 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
U2af1Q9D883 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
U2af1Q9D883 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
U2af1Q9D883 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
U2af1Q9D883 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
U2af1Q9D883 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
U2af1Q9D883 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
U2af1Q9D883 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
U2af1Q9D883 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
U2af1Q9D883 Gm44891-201ENSMUST00000208817 2223 ntBASIC17.16■□□□□ 0.34
U2af1Q9D883 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
U2af1Q9D883 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
U2af1Q9D883 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
U2af1Q9D883 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
U2af1Q9D883 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC17.16■□□□□ 0.34
U2af1Q9D883 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC17.16■□□□□ 0.34
U2af1Q9D883 Gm4935-201ENSMUST00000221316 1198 ntBASIC17.16■□□□□ 0.34
U2af1Q9D883 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
U2af1Q9D883 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
U2af1Q9D883 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
U2af1Q9D883 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
U2af1Q9D883 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
U2af1Q9D883 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
U2af1Q9D883 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
U2af1Q9D883 Gm43579-201ENSMUST00000202387 1307 ntBASIC17.16■□□□□ 0.34
U2af1Q9D883 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
U2af1Q9D883 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC17.16■□□□□ 0.34
U2af1Q9D883 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
U2af1Q9D883 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
U2af1Q9D883 Gm9025-201ENSMUST00000122415 1575 ntBASIC17.15■□□□□ 0.34
U2af1Q9D883 AC113060.1-201ENSMUST00000225689 1573 ntBASIC17.15■□□□□ 0.34
U2af1Q9D883 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
U2af1Q9D883 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
U2af1Q9D883 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
U2af1Q9D883 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
U2af1Q9D883 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
U2af1Q9D883 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
U2af1Q9D883 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
U2af1Q9D883 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
U2af1Q9D883 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC17.15■□□□□ 0.34
U2af1Q9D883 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC17.15■□□□□ 0.34
U2af1Q9D883 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC17.15■□□□□ 0.34
U2af1Q9D883 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
U2af1Q9D883 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC17.15■□□□□ 0.34
U2af1Q9D883 Gm9061-201ENSMUST00000182707 1006 ntBASIC17.15■□□□□ 0.34
U2af1Q9D883 AC166051.1-201ENSMUST00000214313 210 ntBASIC17.15■□□□□ 0.34
U2af1Q9D883 Gm17823-201ENSMUST00000217830 1006 ntBASIC17.15■□□□□ 0.34
U2af1Q9D883 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
U2af1Q9D883 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
U2af1Q9D883 Gm9823-201ENSMUST00000051212 327 ntBASIC17.15■□□□□ 0.34
U2af1Q9D883 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
U2af1Q9D883 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
U2af1Q9D883 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
U2af1Q9D883 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
U2af1Q9D883 Gm38157-201ENSMUST00000194178 1698 ntBASIC17.15■□□□□ 0.34
U2af1Q9D883 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC17.15■□□□□ 0.34
U2af1Q9D883 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
U2af1Q9D883 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
U2af1Q9D883 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
U2af1Q9D883 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
U2af1Q9D883 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
U2af1Q9D883 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
U2af1Q9D883 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
U2af1Q9D883 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
U2af1Q9D883 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
U2af1Q9D883 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC17.14■□□□□ 0.33
U2af1Q9D883 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
U2af1Q9D883 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
U2af1Q9D883 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
U2af1Q9D883 Gm15897-201ENSMUST00000117770 1486 ntBASIC17.14■□□□□ 0.33
U2af1Q9D883 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
U2af1Q9D883 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
U2af1Q9D883 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
U2af1Q9D883 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
U2af1Q9D883 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
U2af1Q9D883 Gm11591-201ENSMUST00000120063 702 ntBASIC17.14■□□□□ 0.33
U2af1Q9D883 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
U2af1Q9D883 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC17.14■□□□□ 0.33
U2af1Q9D883 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC17.14■□□□□ 0.33
U2af1Q9D883 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
U2af1Q9D883 Gm18054-201ENSMUST00000207539 555 ntBASIC17.14■□□□□ 0.33
U2af1Q9D883 Gm19309-201ENSMUST00000218295 205 ntBASIC17.14■□□□□ 0.33
U2af1Q9D883 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
U2af1Q9D883 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
U2af1Q9D883 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
U2af1Q9D883 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
U2af1Q9D883 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
U2af1Q9D883 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
U2af1Q9D883 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
U2af1Q9D883 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
U2af1Q9D883 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
U2af1Q9D883 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
U2af1Q9D883 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
U2af1Q9D883 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms