Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Chmp5Q9D7S9 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp5Q9D7S9 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp5Q9D7S9 AC096628.2-201ENSMUST00000225443 1413 ntBASIC16.35■□□□□ 0.21
Chmp5Q9D7S9 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp5Q9D7S9 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp5Q9D7S9 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC16.35■□□□□ 0.21
Chmp5Q9D7S9 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Chmp5Q9D7S9 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp5Q9D7S9 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp5Q9D7S9 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp5Q9D7S9 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp5Q9D7S9 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp5Q9D7S9 Gm23935-201ENSMUST00000102303 57 ntBASIC16.34■□□□□ 0.21
Chmp5Q9D7S9 Gm24270-201ENSMUST00000102326 57 ntBASIC16.34■□□□□ 0.21
Chmp5Q9D7S9 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
Chmp5Q9D7S9 Gm15376-201ENSMUST00000122258 783 ntBASIC16.34■□□□□ 0.21
Chmp5Q9D7S9 Gm26464-201ENSMUST00000157094 305 ntBASIC16.34■□□□□ 0.21
Chmp5Q9D7S9 Gm24245-201ENSMUST00000157318 57 ntBASIC16.34■□□□□ 0.21
Chmp5Q9D7S9 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC16.34■□□□□ 0.21
Chmp5Q9D7S9 Gm6736-201ENSMUST00000166583 948 ntBASIC16.34■□□□□ 0.21
Chmp5Q9D7S9 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp5Q9D7S9 Gm9522-201ENSMUST00000182394 926 ntBASIC16.34■□□□□ 0.21
Chmp5Q9D7S9 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp5Q9D7S9 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp5Q9D7S9 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
Chmp5Q9D7S9 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp5Q9D7S9 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp5Q9D7S9 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp5Q9D7S9 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp5Q9D7S9 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp5Q9D7S9 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp5Q9D7S9 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp5Q9D7S9 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp5Q9D7S9 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp5Q9D7S9 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp5Q9D7S9 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Chmp5Q9D7S9 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Chmp5Q9D7S9 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Chmp5Q9D7S9 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Chmp5Q9D7S9 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Chmp5Q9D7S9 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Chmp5Q9D7S9 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Chmp5Q9D7S9 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Chmp5Q9D7S9 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Chmp5Q9D7S9 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Chmp5Q9D7S9 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Chmp5Q9D7S9 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Chmp5Q9D7S9 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Chmp5Q9D7S9 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Chmp5Q9D7S9 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Chmp5Q9D7S9 Gm45266-201ENSMUST00000210111 2173 ntBASIC16.33■□□□□ 0.2
Chmp5Q9D7S9 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC16.33■□□□□ 0.2
Chmp5Q9D7S9 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC16.33■□□□□ 0.2
Chmp5Q9D7S9 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp5Q9D7S9 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp5Q9D7S9 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp5Q9D7S9 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp5Q9D7S9 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp5Q9D7S9 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp5Q9D7S9 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp5Q9D7S9 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Chmp5Q9D7S9 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp5Q9D7S9 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Chmp5Q9D7S9 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC16.33■□□□□ 0.2
Chmp5Q9D7S9 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC16.33■□□□□ 0.2
Chmp5Q9D7S9 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC16.33■□□□□ 0.2
Chmp5Q9D7S9 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC16.33■□□□□ 0.2
Chmp5Q9D7S9 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC16.33■□□□□ 0.2
Chmp5Q9D7S9 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC16.33■□□□□ 0.2
Chmp5Q9D7S9 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC16.33■□□□□ 0.2
Chmp5Q9D7S9 AC165157.4-201ENSMUST00000220587 139 ntBASIC16.33■□□□□ 0.2
Chmp5Q9D7S9 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC16.33■□□□□ 0.2
Chmp5Q9D7S9 AC139580.1-202ENSMUST00000223574 928 ntBASIC16.33■□□□□ 0.2
Chmp5Q9D7S9 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp5Q9D7S9 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Chmp5Q9D7S9 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp5Q9D7S9 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp5Q9D7S9 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp5Q9D7S9 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp5Q9D7S9 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Chmp5Q9D7S9 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp5Q9D7S9 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Chmp5Q9D7S9 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp5Q9D7S9 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp5Q9D7S9 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp5Q9D7S9 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC16.33■□□□□ 0.2
Chmp5Q9D7S9 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp5Q9D7S9 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC16.32■□□□□ 0.2
Chmp5Q9D7S9 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Chmp5Q9D7S9 Gm11400-201ENSMUST00000120853 1214 ntBASIC16.32■□□□□ 0.2
Chmp5Q9D7S9 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC16.32■□□□□ 0.2
Chmp5Q9D7S9 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp5Q9D7S9 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp5Q9D7S9 Gm19078-201ENSMUST00000206311 727 ntBASIC16.32■□□□□ 0.2
Chmp5Q9D7S9 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp5Q9D7S9 AC073947.2-201ENSMUST00000215888 1130 ntBASIC16.32■□□□□ 0.2
Chmp5Q9D7S9 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Chmp5Q9D7S9 Gm15222-202ENSMUST00000228667 1726 ntBASIC16.32■□□□□ 0.2
Chmp5Q9D7S9 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms