Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sf3a3Q9D554 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sf3a3Q9D554 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Sf3a3Q9D554 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sf3a3Q9D554 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sf3a3Q9D554 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Sf3a3Q9D554 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sf3a3Q9D554 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sf3a3Q9D554 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sf3a3Q9D554 Gm2810-201ENSMUST00000118681 990 ntBASIC13.21□□□□□ -0.29
Sf3a3Q9D554 Gm14140-201ENSMUST00000119999 995 ntBASIC13.21□□□□□ -0.29
Sf3a3Q9D554 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sf3a3Q9D554 Gm28659-201ENSMUST00000188013 759 ntBASIC13.21□□□□□ -0.29
Sf3a3Q9D554 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sf3a3Q9D554 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sf3a3Q9D554 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Sf3a3Q9D554 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sf3a3Q9D554 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sf3a3Q9D554 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
Sf3a3Q9D554 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sf3a3Q9D554 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Sf3a3Q9D554 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sf3a3Q9D554 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sf3a3Q9D554 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sf3a3Q9D554 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sf3a3Q9D554 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sf3a3Q9D554 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.21□□□□□ -0.3
Sf3a3Q9D554 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sf3a3Q9D554 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Sf3a3Q9D554 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sf3a3Q9D554 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3a3Q9D554 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.2□□□□□ -0.3
Sf3a3Q9D554 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3a3Q9D554 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3a3Q9D554 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3a3Q9D554 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.2□□□□□ -0.3
Sf3a3Q9D554 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Sf3a3Q9D554 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3a3Q9D554 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3a3Q9D554 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC13.2□□□□□ -0.3
Sf3a3Q9D554 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3a3Q9D554 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3a3Q9D554 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3a3Q9D554 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3a3Q9D554 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3a3Q9D554 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.2□□□□□ -0.3
Sf3a3Q9D554 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3a3Q9D554 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3a3Q9D554 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.2□□□□□ -0.3
Sf3a3Q9D554 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3a3Q9D554 Gm8927-201ENSMUST00000181978 981 ntBASIC13.2□□□□□ -0.3
Sf3a3Q9D554 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3a3Q9D554 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.2□□□□□ -0.3
Sf3a3Q9D554 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.2□□□□□ -0.3
Sf3a3Q9D554 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3a3Q9D554 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Sf3a3Q9D554 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Sf3a3Q9D554 Gm3222-201ENSMUST00000071282 990 ntBASIC13.2□□□□□ -0.3
Sf3a3Q9D554 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3a3Q9D554 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC13.2□□□□□ -0.3
Sf3a3Q9D554 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3a3Q9D554 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3a3Q9D554 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.2□□□□□ -0.3
Sf3a3Q9D554 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3a3Q9D554 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.2□□□□□ -0.3
Sf3a3Q9D554 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3a3Q9D554 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Sf3a3Q9D554 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3a3Q9D554 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3a3Q9D554 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3a3Q9D554 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3a3Q9D554 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3a3Q9D554 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3a3Q9D554 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.2□□□□□ -0.3
Sf3a3Q9D554 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3a3Q9D554 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Sf3a3Q9D554 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sf3a3Q9D554 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sf3a3Q9D554 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.19□□□□□ -0.3
Sf3a3Q9D554 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Sf3a3Q9D554 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sf3a3Q9D554 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sf3a3Q9D554 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sf3a3Q9D554 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sf3a3Q9D554 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sf3a3Q9D554 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Sf3a3Q9D554 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sf3a3Q9D554 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sf3a3Q9D554 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.19□□□□□ -0.3
Sf3a3Q9D554 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.19□□□□□ -0.3
Sf3a3Q9D554 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.19□□□□□ -0.3
Sf3a3Q9D554 Gm13015-201ENSMUST00000118674 204 ntBASIC13.19□□□□□ -0.3
Sf3a3Q9D554 Gm11025-201ENSMUST00000140773 466 ntBASIC13.19□□□□□ -0.3
Sf3a3Q9D554 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.19□□□□□ -0.3
Sf3a3Q9D554 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.19□□□□□ -0.3
Sf3a3Q9D554 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sf3a3Q9D554 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.19□□□□□ -0.3
Sf3a3Q9D554 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.19□□□□□ -0.3
Sf3a3Q9D554 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sf3a3Q9D554 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms