Protein–RNA interactions for Protein: Q9D3S3

Snx29, Sorting nexin-29, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx29Q9D3S3 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Snx29Q9D3S3 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Snx29Q9D3S3 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Snx29Q9D3S3 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.29□□□□□ -0.12
Snx29Q9D3S3 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Snx29Q9D3S3 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Snx29Q9D3S3 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.29□□□□□ -0.12
Snx29Q9D3S3 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC14.29□□□□□ -0.12
Snx29Q9D3S3 Gm13570-201ENSMUST00000140763 309 ntBASIC14.29□□□□□ -0.12
Snx29Q9D3S3 Gm25043-201ENSMUST00000158604 212 ntBASIC14.29□□□□□ -0.12
Snx29Q9D3S3 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Snx29Q9D3S3 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Snx29Q9D3S3 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Snx29Q9D3S3 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Snx29Q9D3S3 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC14.29□□□□□ -0.12
Snx29Q9D3S3 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Snx29Q9D3S3 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC14.29□□□□□ -0.12
Snx29Q9D3S3 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC14.29□□□□□ -0.12
Snx29Q9D3S3 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC14.29□□□□□ -0.12
Snx29Q9D3S3 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Snx29Q9D3S3 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Snx29Q9D3S3 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Snx29Q9D3S3 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Snx29Q9D3S3 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Snx29Q9D3S3 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Snx29Q9D3S3 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Snx29Q9D3S3 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Snx29Q9D3S3 Gm9025-201ENSMUST00000122415 1575 ntBASIC14.29□□□□□ -0.12
Snx29Q9D3S3 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14.29□□□□□ -0.12
Snx29Q9D3S3 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Snx29Q9D3S3 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Snx29Q9D3S3 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Snx29Q9D3S3 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.29□□□□□ -0.12
Snx29Q9D3S3 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Snx29Q9D3S3 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Snx29Q9D3S3 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Snx29Q9D3S3 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Snx29Q9D3S3 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Snx29Q9D3S3 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Snx29Q9D3S3 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Snx29Q9D3S3 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Snx29Q9D3S3 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Snx29Q9D3S3 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Snx29Q9D3S3 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Snx29Q9D3S3 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Snx29Q9D3S3 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Snx29Q9D3S3 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Snx29Q9D3S3 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Snx29Q9D3S3 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Snx29Q9D3S3 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Snx29Q9D3S3 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Snx29Q9D3S3 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC14.28□□□□□ -0.12
Snx29Q9D3S3 Gm11439-201ENSMUST00000118598 409 ntBASIC14.28□□□□□ -0.12
Snx29Q9D3S3 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC14.28□□□□□ -0.12
Snx29Q9D3S3 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC14.28□□□□□ -0.12
Snx29Q9D3S3 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Snx29Q9D3S3 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Snx29Q9D3S3 Gm37201-201ENSMUST00000191845 523 ntBASIC14.28□□□□□ -0.12
Snx29Q9D3S3 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC14.28□□□□□ -0.12
Snx29Q9D3S3 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC14.28□□□□□ -0.12
Snx29Q9D3S3 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Snx29Q9D3S3 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Snx29Q9D3S3 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Snx29Q9D3S3 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Snx29Q9D3S3 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Snx29Q9D3S3 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Snx29Q9D3S3 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Snx29Q9D3S3 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Snx29Q9D3S3 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Snx29Q9D3S3 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Snx29Q9D3S3 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Snx29Q9D3S3 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Snx29Q9D3S3 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Snx29Q9D3S3 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Snx29Q9D3S3 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Snx29Q9D3S3 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Snx29Q9D3S3 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
Snx29Q9D3S3 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Snx29Q9D3S3 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Snx29Q9D3S3 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Snx29Q9D3S3 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Snx29Q9D3S3 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Snx29Q9D3S3 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Snx29Q9D3S3 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Snx29Q9D3S3 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Snx29Q9D3S3 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Snx29Q9D3S3 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Snx29Q9D3S3 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Snx29Q9D3S3 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Snx29Q9D3S3 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Snx29Q9D3S3 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Snx29Q9D3S3 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Snx29Q9D3S3 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC14.27□□□□□ -0.13
Snx29Q9D3S3 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Snx29Q9D3S3 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC14.27□□□□□ -0.13
Snx29Q9D3S3 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.13
Snx29Q9D3S3 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Snx29Q9D3S3 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Snx29Q9D3S3 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Snx29Q9D3S3 Gm9445-201ENSMUST00000207454 1285 ntBASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms