Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim42Q9D2H5 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim42Q9D2H5 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim42Q9D2H5 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim42Q9D2H5 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim42Q9D2H5 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim42Q9D2H5 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim42Q9D2H5 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim42Q9D2H5 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim42Q9D2H5 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim42Q9D2H5 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim42Q9D2H5 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim42Q9D2H5 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim42Q9D2H5 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.11□□□□□ -0.31
Trim42Q9D2H5 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.11□□□□□ -0.31
Trim42Q9D2H5 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.11□□□□□ -0.31
Trim42Q9D2H5 Gm5264-201ENSMUST00000190584 848 ntBASIC13.11□□□□□ -0.31
Trim42Q9D2H5 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim42Q9D2H5 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.11□□□□□ -0.31
Trim42Q9D2H5 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim42Q9D2H5 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim42Q9D2H5 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim42Q9D2H5 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim42Q9D2H5 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim42Q9D2H5 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim42Q9D2H5 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim42Q9D2H5 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim42Q9D2H5 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim42Q9D2H5 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim42Q9D2H5 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim42Q9D2H5 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim42Q9D2H5 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim42Q9D2H5 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.11□□□□□ -0.31
Trim42Q9D2H5 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim42Q9D2H5 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim42Q9D2H5 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim42Q9D2H5 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim42Q9D2H5 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim42Q9D2H5 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim42Q9D2H5 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim42Q9D2H5 Gm10110-202ENSMUST00000228705 3220 ntBASIC13.1□□□□□ -0.31
Trim42Q9D2H5 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.1□□□□□ -0.31
Trim42Q9D2H5 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim42Q9D2H5 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim42Q9D2H5 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim42Q9D2H5 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.1□□□□□ -0.31
Trim42Q9D2H5 Gm25287-201ENSMUST00000103846 110 ntBASIC13.1□□□□□ -0.31
Trim42Q9D2H5 Gm22918-201ENSMUST00000103855 110 ntBASIC13.1□□□□□ -0.31
Trim42Q9D2H5 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.1□□□□□ -0.31
Trim42Q9D2H5 Gm6754-201ENSMUST00000117124 913 ntBASIC13.1□□□□□ -0.31
Trim42Q9D2H5 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim42Q9D2H5 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim42Q9D2H5 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC13.1□□□□□ -0.31
Trim42Q9D2H5 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim42Q9D2H5 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Trim42Q9D2H5 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim42Q9D2H5 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Trim42Q9D2H5 Gm18766-201ENSMUST00000189811 808 ntBASIC13.1□□□□□ -0.31
Trim42Q9D2H5 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim42Q9D2H5 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.1□□□□□ -0.31
Trim42Q9D2H5 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.1□□□□□ -0.31
Trim42Q9D2H5 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.1□□□□□ -0.31
Trim42Q9D2H5 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim42Q9D2H5 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim42Q9D2H5 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim42Q9D2H5 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim42Q9D2H5 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim42Q9D2H5 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim42Q9D2H5 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
Trim42Q9D2H5 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trim42Q9D2H5 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Trim42Q9D2H5 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim42Q9D2H5 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim42Q9D2H5 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trim42Q9D2H5 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim42Q9D2H5 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim42Q9D2H5 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
Trim42Q9D2H5 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim42Q9D2H5 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim42Q9D2H5 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim42Q9D2H5 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim42Q9D2H5 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim42Q9D2H5 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim42Q9D2H5 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Trim42Q9D2H5 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim42Q9D2H5 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.1□□□□□ -0.31
Trim42Q9D2H5 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim42Q9D2H5 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim42Q9D2H5 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim42Q9D2H5 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim42Q9D2H5 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim42Q9D2H5 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim42Q9D2H5 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim42Q9D2H5 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim42Q9D2H5 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim42Q9D2H5 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim42Q9D2H5 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim42Q9D2H5 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim42Q9D2H5 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.09□□□□□ -0.31
Trim42Q9D2H5 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms