Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.09□□□□□ -0.47
Trim13Q9CYB0 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim13Q9CYB0 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim13Q9CYB0 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim13Q9CYB0 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.09□□□□□ -0.47
Trim13Q9CYB0 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim13Q9CYB0 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Trim13Q9CYB0 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim13Q9CYB0 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim13Q9CYB0 Gm25007-201ENSMUST00000083808 133 ntBASIC12.09□□□□□ -0.47
Trim13Q9CYB0 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trim13Q9CYB0 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trim13Q9CYB0 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.09□□□□□ -0.47
Trim13Q9CYB0 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.09□□□□□ -0.47
Trim13Q9CYB0 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.09□□□□□ -0.47
Trim13Q9CYB0 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim13Q9CYB0 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim13Q9CYB0 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim13Q9CYB0 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim13Q9CYB0 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trim13Q9CYB0 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim13Q9CYB0 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim13Q9CYB0 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim13Q9CYB0 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim13Q9CYB0 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trim13Q9CYB0 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trim13Q9CYB0 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim13Q9CYB0 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim13Q9CYB0 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Trim13Q9CYB0 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Trim13Q9CYB0 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Trim13Q9CYB0 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim13Q9CYB0 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim13Q9CYB0 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim13Q9CYB0 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim13Q9CYB0 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim13Q9CYB0 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Trim13Q9CYB0 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim13Q9CYB0 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim13Q9CYB0 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.08□□□□□ -0.48
Trim13Q9CYB0 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim13Q9CYB0 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim13Q9CYB0 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim13Q9CYB0 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trim13Q9CYB0 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Trim13Q9CYB0 Gm12585-201ENSMUST00000117307 290 ntBASIC12.08□□□□□ -0.48
Trim13Q9CYB0 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.08□□□□□ -0.48
Trim13Q9CYB0 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.08□□□□□ -0.48
Trim13Q9CYB0 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.08□□□□□ -0.48
Trim13Q9CYB0 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.08□□□□□ -0.48
Trim13Q9CYB0 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.08□□□□□ -0.48
Trim13Q9CYB0 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.08□□□□□ -0.48
Trim13Q9CYB0 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim13Q9CYB0 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.08□□□□□ -0.48
Trim13Q9CYB0 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.08□□□□□ -0.48
Trim13Q9CYB0 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.08□□□□□ -0.48
Trim13Q9CYB0 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trim13Q9CYB0 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim13Q9CYB0 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim13Q9CYB0 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim13Q9CYB0 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.08□□□□□ -0.48
Trim13Q9CYB0 Gm46209-201ENSMUST00000217912 553 ntBASIC12.08□□□□□ -0.48
Trim13Q9CYB0 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.08□□□□□ -0.48
Trim13Q9CYB0 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Trim13Q9CYB0 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim13Q9CYB0 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim13Q9CYB0 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trim13Q9CYB0 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.08□□□□□ -0.48
Trim13Q9CYB0 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim13Q9CYB0 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim13Q9CYB0 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim13Q9CYB0 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim13Q9CYB0 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim13Q9CYB0 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim13Q9CYB0 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim13Q9CYB0 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim13Q9CYB0 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim13Q9CYB0 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim13Q9CYB0 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trim13Q9CYB0 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim13Q9CYB0 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim13Q9CYB0 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim13Q9CYB0 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim13Q9CYB0 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim13Q9CYB0 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trim13Q9CYB0 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim13Q9CYB0 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim13Q9CYB0 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim13Q9CYB0 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim13Q9CYB0 Gm6415-201ENSMUST00000118488 348 ntBASIC12.07□□□□□ -0.48
Trim13Q9CYB0 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Trim13Q9CYB0 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.07□□□□□ -0.48
Trim13Q9CYB0 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.07□□□□□ -0.48
Trim13Q9CYB0 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim13Q9CYB0 Gm27533-201ENSMUST00000183800 152 ntBASIC12.07□□□□□ -0.48
Trim13Q9CYB0 Gm10253-201ENSMUST00000194270 940 ntBASIC12.07□□□□□ -0.48
Trim13Q9CYB0 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.07□□□□□ -0.48
Trim13Q9CYB0 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.07□□□□□ -0.48
Trim13Q9CYB0 Gm5779-201ENSMUST00000218467 910 ntBASIC12.07□□□□□ -0.48
Trim13Q9CYB0 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms