Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.97□□□□□ -0.33
Ssu72Q9CY97 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.97□□□□□ -0.33
Ssu72Q9CY97 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssu72Q9CY97 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssu72Q9CY97 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.97□□□□□ -0.33
Ssu72Q9CY97 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssu72Q9CY97 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssu72Q9CY97 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ssu72Q9CY97 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssu72Q9CY97 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssu72Q9CY97 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssu72Q9CY97 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssu72Q9CY97 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssu72Q9CY97 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssu72Q9CY97 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ssu72Q9CY97 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssu72Q9CY97 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ssu72Q9CY97 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ssu72Q9CY97 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ssu72Q9CY97 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ssu72Q9CY97 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ssu72Q9CY97 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Ssu72Q9CY97 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ssu72Q9CY97 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ssu72Q9CY97 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ssu72Q9CY97 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Ssu72Q9CY97 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.96□□□□□ -0.33
Ssu72Q9CY97 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ssu72Q9CY97 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ssu72Q9CY97 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ssu72Q9CY97 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ssu72Q9CY97 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ssu72Q9CY97 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ssu72Q9CY97 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ssu72Q9CY97 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Ssu72Q9CY97 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ssu72Q9CY97 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ssu72Q9CY97 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ssu72Q9CY97 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ssu72Q9CY97 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ssu72Q9CY97 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ssu72Q9CY97 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ssu72Q9CY97 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ssu72Q9CY97 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.96□□□□□ -0.33
Ssu72Q9CY97 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.96□□□□□ -0.33
Ssu72Q9CY97 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ssu72Q9CY97 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Ssu72Q9CY97 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.96□□□□□ -0.33
Ssu72Q9CY97 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.96□□□□□ -0.33
Ssu72Q9CY97 Gm27618-201ENSMUST00000183671 60 ntBASIC12.96□□□□□ -0.33
Ssu72Q9CY97 Gm42790-201ENSMUST00000201268 969 ntBASIC12.96□□□□□ -0.33
Ssu72Q9CY97 Gm19078-201ENSMUST00000206311 727 ntBASIC12.96□□□□□ -0.33
Ssu72Q9CY97 Chchd1-203ENSMUST00000224633 557 ntBASIC12.96□□□□□ -0.33
Ssu72Q9CY97 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ssu72Q9CY97 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ssu72Q9CY97 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ssu72Q9CY97 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.96□□□□□ -0.33
Ssu72Q9CY97 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ssu72Q9CY97 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Ssu72Q9CY97 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.96□□□□□ -0.34
Ssu72Q9CY97 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.96□□□□□ -0.34
Ssu72Q9CY97 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ssu72Q9CY97 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ssu72Q9CY97 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ssu72Q9CY97 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ssu72Q9CY97 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ssu72Q9CY97 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ssu72Q9CY97 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.95□□□□□ -0.34
Ssu72Q9CY97 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ssu72Q9CY97 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ssu72Q9CY97 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ssu72Q9CY97 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.95□□□□□ -0.34
Ssu72Q9CY97 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ssu72Q9CY97 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ssu72Q9CY97 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.95□□□□□ -0.34
Ssu72Q9CY97 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ssu72Q9CY97 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Ssu72Q9CY97 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ssu72Q9CY97 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.95□□□□□ -0.34
Ssu72Q9CY97 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.95□□□□□ -0.34
Ssu72Q9CY97 Gm11524-201ENSMUST00000119349 807 ntBASIC12.95□□□□□ -0.34
Ssu72Q9CY97 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.95□□□□□ -0.34
Ssu72Q9CY97 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.95□□□□□ -0.34
Ssu72Q9CY97 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.95□□□□□ -0.34
Ssu72Q9CY97 Gm9630-201ENSMUST00000178304 885 ntBASIC12.95□□□□□ -0.34
Ssu72Q9CY97 Gm27430-201ENSMUST00000184585 107 ntBASIC12.95□□□□□ -0.34
Ssu72Q9CY97 Gm27741-201ENSMUST00000185060 237 ntBASIC12.95□□□□□ -0.34
Ssu72Q9CY97 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.95□□□□□ -0.34
Ssu72Q9CY97 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ssu72Q9CY97 Gm44333-201ENSMUST00000197168 107 ntBASIC12.95□□□□□ -0.34
Ssu72Q9CY97 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ssu72Q9CY97 Gm7775-201ENSMUST00000218871 853 ntBASIC12.95□□□□□ -0.34
Ssu72Q9CY97 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ssu72Q9CY97 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ssu72Q9CY97 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.95□□□□□ -0.34
Ssu72Q9CY97 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ssu72Q9CY97 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ssu72Q9CY97 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ssu72Q9CY97 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ssu72Q9CY97 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms