Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Smc3Q9CW03 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC15.37■□□□□ 0.05
Smc3Q9CW03 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC15.37■□□□□ 0.05
Smc3Q9CW03 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smc3Q9CW03 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smc3Q9CW03 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smc3Q9CW03 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Smc3Q9CW03 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smc3Q9CW03 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smc3Q9CW03 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smc3Q9CW03 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC15.37■□□□□ 0.05
Smc3Q9CW03 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Smc3Q9CW03 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Smc3Q9CW03 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Smc3Q9CW03 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Smc3Q9CW03 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smc3Q9CW03 AC132467.2-202ENSMUST00000227726 559 ntBASIC15.37■□□□□ 0.05
Smc3Q9CW03 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smc3Q9CW03 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC15.37■□□□□ 0.05
Smc3Q9CW03 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smc3Q9CW03 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smc3Q9CW03 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Smc3Q9CW03 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smc3Q9CW03 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smc3Q9CW03 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Smc3Q9CW03 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smc3Q9CW03 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Smc3Q9CW03 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smc3Q9CW03 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smc3Q9CW03 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC15.36■□□□□ 0.05
Smc3Q9CW03 Gm38385-201ENSMUST00000194454 2351 ntBASIC15.36■□□□□ 0.05
Smc3Q9CW03 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smc3Q9CW03 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC15.36■□□□□ 0.05
Smc3Q9CW03 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smc3Q9CW03 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smc3Q9CW03 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC15.36■□□□□ 0.05
Smc3Q9CW03 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smc3Q9CW03 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smc3Q9CW03 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smc3Q9CW03 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Smc3Q9CW03 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smc3Q9CW03 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smc3Q9CW03 Gm10040-201ENSMUST00000080726 1662 ntBASIC15.36■□□□□ 0.05
Smc3Q9CW03 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smc3Q9CW03 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Smc3Q9CW03 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC15.36■□□□□ 0.05
Smc3Q9CW03 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smc3Q9CW03 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC15.36■□□□□ 0.05
Smc3Q9CW03 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC15.36■□□□□ 0.05
Smc3Q9CW03 Gm42612-201ENSMUST00000197986 623 ntBASIC15.36■□□□□ 0.05
Smc3Q9CW03 Gm43170-201ENSMUST00000199827 612 ntBASIC15.36■□□□□ 0.05
Smc3Q9CW03 Gm44985-201ENSMUST00000206202 1016 ntBASIC15.36■□□□□ 0.05
Smc3Q9CW03 AC093022.5-201ENSMUST00000226841 1079 ntBASIC15.36■□□□□ 0.05
Smc3Q9CW03 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smc3Q9CW03 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smc3Q9CW03 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC15.36■□□□□ 0.05
Smc3Q9CW03 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC15.36■□□□□ 0.05
Smc3Q9CW03 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC15.36■□□□□ 0.05
Smc3Q9CW03 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smc3Q9CW03 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Smc3Q9CW03 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Smc3Q9CW03 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC15.36■□□□□ 0.05
Smc3Q9CW03 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Smc3Q9CW03 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smc3Q9CW03 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Smc3Q9CW03 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smc3Q9CW03 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smc3Q9CW03 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC15.36■□□□□ 0.05
Smc3Q9CW03 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC15.36■□□□□ 0.05
Smc3Q9CW03 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Smc3Q9CW03 AC125108.1-201ENSMUST00000218986 2330 ntBASIC15.35■□□□□ 0.05
Smc3Q9CW03 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smc3Q9CW03 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Smc3Q9CW03 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
Smc3Q9CW03 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC15.35■□□□□ 0.05
Smc3Q9CW03 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smc3Q9CW03 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smc3Q9CW03 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Smc3Q9CW03 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smc3Q9CW03 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Smc3Q9CW03 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC15.35■□□□□ 0.05
Smc3Q9CW03 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smc3Q9CW03 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC15.35■□□□□ 0.05
Smc3Q9CW03 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC15.35■□□□□ 0.05
Smc3Q9CW03 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smc3Q9CW03 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Smc3Q9CW03 Gm38223-201ENSMUST00000194484 695 ntBASIC15.35■□□□□ 0.05
Smc3Q9CW03 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Smc3Q9CW03 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC15.35■□□□□ 0.05
Smc3Q9CW03 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smc3Q9CW03 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smc3Q9CW03 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
Smc3Q9CW03 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smc3Q9CW03 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Smc3Q9CW03 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smc3Q9CW03 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
Smc3Q9CW03 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smc3Q9CW03 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC15.35■□□□□ 0.05
Smc3Q9CW03 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC15.35■□□□□ 0.05
Smc3Q9CW03 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms