Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Rpa3Q9CQ71 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpa3Q9CQ71 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpa3Q9CQ71 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.83□□□□□ -0.2
Rpa3Q9CQ71 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.83□□□□□ -0.2
Rpa3Q9CQ71 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpa3Q9CQ71 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpa3Q9CQ71 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rpa3Q9CQ71 Gm8213-201ENSMUST00000118191 441 ntBASIC13.83□□□□□ -0.2
Rpa3Q9CQ71 Gm27486-201ENSMUST00000184923 80 ntBASIC13.83□□□□□ -0.2
Rpa3Q9CQ71 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.83□□□□□ -0.2
Rpa3Q9CQ71 Gm8598-201ENSMUST00000221184 836 ntBASIC13.83□□□□□ -0.2
Rpa3Q9CQ71 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.83□□□□□ -0.2
Rpa3Q9CQ71 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpa3Q9CQ71 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpa3Q9CQ71 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Rpa3Q9CQ71 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpa3Q9CQ71 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.83□□□□□ -0.2
Rpa3Q9CQ71 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.83□□□□□ -0.2
Rpa3Q9CQ71 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpa3Q9CQ71 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rpa3Q9CQ71 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpa3Q9CQ71 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpa3Q9CQ71 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.83□□□□□ -0.2
Rpa3Q9CQ71 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpa3Q9CQ71 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpa3Q9CQ71 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpa3Q9CQ71 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rpa3Q9CQ71 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rpa3Q9CQ71 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rpa3Q9CQ71 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpa3Q9CQ71 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpa3Q9CQ71 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpa3Q9CQ71 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Rpa3Q9CQ71 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpa3Q9CQ71 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpa3Q9CQ71 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rpa3Q9CQ71 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Rpa3Q9CQ71 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpa3Q9CQ71 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpa3Q9CQ71 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpa3Q9CQ71 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Rpa3Q9CQ71 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Rpa3Q9CQ71 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpa3Q9CQ71 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpa3Q9CQ71 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpa3Q9CQ71 Gm11814-201ENSMUST00000119515 929 ntBASIC13.82□□□□□ -0.2
Rpa3Q9CQ71 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.82□□□□□ -0.2
Rpa3Q9CQ71 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rpa3Q9CQ71 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.82□□□□□ -0.2
Rpa3Q9CQ71 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Rpa3Q9CQ71 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.82□□□□□ -0.2
Rpa3Q9CQ71 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.82□□□□□ -0.2
Rpa3Q9CQ71 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.82□□□□□ -0.2
Rpa3Q9CQ71 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpa3Q9CQ71 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Rpa3Q9CQ71 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Rpa3Q9CQ71 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpa3Q9CQ71 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpa3Q9CQ71 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Rpa3Q9CQ71 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpa3Q9CQ71 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpa3Q9CQ71 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rpa3Q9CQ71 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpa3Q9CQ71 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.82□□□□□ -0.2
Rpa3Q9CQ71 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.82□□□□□ -0.2
Rpa3Q9CQ71 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rpa3Q9CQ71 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rpa3Q9CQ71 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa3Q9CQ71 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa3Q9CQ71 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa3Q9CQ71 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Rpa3Q9CQ71 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa3Q9CQ71 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa3Q9CQ71 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa3Q9CQ71 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa3Q9CQ71 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Rpa3Q9CQ71 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.81□□□□□ -0.2
Rpa3Q9CQ71 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa3Q9CQ71 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa3Q9CQ71 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa3Q9CQ71 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa3Q9CQ71 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.81□□□□□ -0.2
Rpa3Q9CQ71 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.81□□□□□ -0.2
Rpa3Q9CQ71 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa3Q9CQ71 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa3Q9CQ71 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa3Q9CQ71 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Rpa3Q9CQ71 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.81□□□□□ -0.2
Rpa3Q9CQ71 Gm11618-201ENSMUST00000117946 267 ntBASIC13.81□□□□□ -0.2
Rpa3Q9CQ71 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa3Q9CQ71 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.81□□□□□ -0.2
Rpa3Q9CQ71 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.81□□□□□ -0.2
Rpa3Q9CQ71 Proscos-202ENSMUST00000178990 666 ntBASIC13.81□□□□□ -0.2
Rpa3Q9CQ71 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa3Q9CQ71 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.81□□□□□ -0.2
Rpa3Q9CQ71 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.81□□□□□ -0.2
Rpa3Q9CQ71 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa3Q9CQ71 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa3Q9CQ71 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms