Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim11Q99PQ2 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim11Q99PQ2 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trim11Q99PQ2 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim11Q99PQ2 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim11Q99PQ2 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim11Q99PQ2 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim11Q99PQ2 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.9□□□□□ -0.02
Trim11Q99PQ2 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.9□□□□□ -0.02
Trim11Q99PQ2 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim11Q99PQ2 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.9□□□□□ -0.02
Trim11Q99PQ2 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim11Q99PQ2 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trim11Q99PQ2 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim11Q99PQ2 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim11Q99PQ2 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim11Q99PQ2 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim11Q99PQ2 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim11Q99PQ2 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC14.9□□□□□ -0.02
Trim11Q99PQ2 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trim11Q99PQ2 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim11Q99PQ2 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.9□□□□□ -0.02
Trim11Q99PQ2 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim11Q99PQ2 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim11Q99PQ2 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trim11Q99PQ2 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim11Q99PQ2 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC14.89□□□□□ -0.03
Trim11Q99PQ2 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim11Q99PQ2 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trim11Q99PQ2 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim11Q99PQ2 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim11Q99PQ2 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim11Q99PQ2 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim11Q99PQ2 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim11Q99PQ2 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim11Q99PQ2 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim11Q99PQ2 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim11Q99PQ2 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim11Q99PQ2 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Trim11Q99PQ2 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim11Q99PQ2 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Trim11Q99PQ2 Gm11978-201ENSMUST00000122315 466 ntBASIC14.89□□□□□ -0.03
Trim11Q99PQ2 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.89□□□□□ -0.03
Trim11Q99PQ2 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.89□□□□□ -0.03
Trim11Q99PQ2 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim11Q99PQ2 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim11Q99PQ2 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.89□□□□□ -0.03
Trim11Q99PQ2 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim11Q99PQ2 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.89□□□□□ -0.03
Trim11Q99PQ2 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.89□□□□□ -0.03
Trim11Q99PQ2 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.89□□□□□ -0.03
Trim11Q99PQ2 AC138604.1-201ENSMUST00000226969 739 ntBASIC14.89□□□□□ -0.03
Trim11Q99PQ2 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim11Q99PQ2 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Trim11Q99PQ2 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim11Q99PQ2 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trim11Q99PQ2 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim11Q99PQ2 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim11Q99PQ2 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim11Q99PQ2 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim11Q99PQ2 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.89□□□□□ -0.03
Trim11Q99PQ2 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trim11Q99PQ2 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim11Q99PQ2 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trim11Q99PQ2 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim11Q99PQ2 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim11Q99PQ2 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim11Q99PQ2 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Trim11Q99PQ2 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC14.88□□□□□ -0.03
Trim11Q99PQ2 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim11Q99PQ2 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim11Q99PQ2 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim11Q99PQ2 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim11Q99PQ2 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim11Q99PQ2 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim11Q99PQ2 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim11Q99PQ2 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Trim11Q99PQ2 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trim11Q99PQ2 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trim11Q99PQ2 Gm14350-201ENSMUST00000116642 640 ntBASIC14.88□□□□□ -0.03
Trim11Q99PQ2 Gm16202-201ENSMUST00000117532 544 ntBASIC14.88□□□□□ -0.03
Trim11Q99PQ2 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.88□□□□□ -0.03
Trim11Q99PQ2 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.88□□□□□ -0.03
Trim11Q99PQ2 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.88□□□□□ -0.03
Trim11Q99PQ2 Gm45668-201ENSMUST00000211271 493 ntBASIC14.88□□□□□ -0.03
Trim11Q99PQ2 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.88□□□□□ -0.03
Trim11Q99PQ2 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.88□□□□□ -0.03
Trim11Q99PQ2 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim11Q99PQ2 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim11Q99PQ2 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim11Q99PQ2 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim11Q99PQ2 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim11Q99PQ2 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.88□□□□□ -0.03
Trim11Q99PQ2 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim11Q99PQ2 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Trim11Q99PQ2 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trim11Q99PQ2 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim11Q99PQ2 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim11Q99PQ2 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim11Q99PQ2 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms