Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim33Q99PP7 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim33Q99PP7 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim33Q99PP7 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim33Q99PP7 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim33Q99PP7 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
Trim33Q99PP7 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trim33Q99PP7 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim33Q99PP7 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim33Q99PP7 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim33Q99PP7 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.02□□□□□ -0.33
Trim33Q99PP7 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Trim33Q99PP7 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Trim33Q99PP7 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim33Q99PP7 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim33Q99PP7 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.02□□□□□ -0.33
Trim33Q99PP7 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim33Q99PP7 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.02□□□□□ -0.33
Trim33Q99PP7 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim33Q99PP7 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trim33Q99PP7 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.02□□□□□ -0.33
Trim33Q99PP7 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Trim33Q99PP7 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim33Q99PP7 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trim33Q99PP7 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim33Q99PP7 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.02□□□□□ -0.33
Trim33Q99PP7 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim33Q99PP7 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim33Q99PP7 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim33Q99PP7 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim33Q99PP7 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trim33Q99PP7 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim33Q99PP7 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim33Q99PP7 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim33Q99PP7 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim33Q99PP7 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trim33Q99PP7 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim33Q99PP7 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim33Q99PP7 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim33Q99PP7 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.01□□□□□ -0.33
Trim33Q99PP7 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim33Q99PP7 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trim33Q99PP7 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim33Q99PP7 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim33Q99PP7 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim33Q99PP7 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim33Q99PP7 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim33Q99PP7 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trim33Q99PP7 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim33Q99PP7 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trim33Q99PP7 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.01□□□□□ -0.33
Trim33Q99PP7 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim33Q99PP7 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.01□□□□□ -0.33
Trim33Q99PP7 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim33Q99PP7 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim33Q99PP7 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim33Q99PP7 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim33Q99PP7 Gm13183-201ENSMUST00000118615 789 ntBASIC13.01□□□□□ -0.33
Trim33Q99PP7 Gm11424-201ENSMUST00000121929 829 ntBASIC13.01□□□□□ -0.33
Trim33Q99PP7 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim33Q99PP7 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim33Q99PP7 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Trim33Q99PP7 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Trim33Q99PP7 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim33Q99PP7 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim33Q99PP7 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim33Q99PP7 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim33Q99PP7 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim33Q99PP7 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim33Q99PP7 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim33Q99PP7 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim33Q99PP7 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim33Q99PP7 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim33Q99PP7 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim33Q99PP7 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim33Q99PP7 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim33Q99PP7 Gm37057-201ENSMUST00000192624 1916 ntBASIC13.01□□□□□ -0.33
Trim33Q99PP7 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim33Q99PP7 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim33Q99PP7 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
Trim33Q99PP7 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim33Q99PP7 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim33Q99PP7 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim33Q99PP7 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim33Q99PP7 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim33Q99PP7 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim33Q99PP7 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim33Q99PP7 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim33Q99PP7 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim33Q99PP7 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim33Q99PP7 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim33Q99PP7 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim33Q99PP7 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim33Q99PP7 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trim33Q99PP7 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trim33Q99PP7 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim33Q99PP7 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim33Q99PP7 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trim33Q99PP7 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim33Q99PP7 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms