Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh15Q99PJ1 Gm16071-201ENSMUST00000119589 793 ntBASIC14.4□□□□□ -0.1
Pcdh15Q99PJ1 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh15Q99PJ1 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC14.4□□□□□ -0.1
Pcdh15Q99PJ1 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh15Q99PJ1 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh15Q99PJ1 Gm23045-201ENSMUST00000175041 96 ntBASIC14.4□□□□□ -0.1
Pcdh15Q99PJ1 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC14.4□□□□□ -0.1
Pcdh15Q99PJ1 Gm8343-201ENSMUST00000182705 994 ntBASIC14.4□□□□□ -0.1
Pcdh15Q99PJ1 Gm17826-201ENSMUST00000189720 798 ntBASIC14.4□□□□□ -0.1
Pcdh15Q99PJ1 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC14.4□□□□□ -0.1
Pcdh15Q99PJ1 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC14.4□□□□□ -0.1
Pcdh15Q99PJ1 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh15Q99PJ1 Mirlet7i-201ENSMUST00000083472 85 ntBASIC14.4□□□□□ -0.1
Pcdh15Q99PJ1 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh15Q99PJ1 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh15Q99PJ1 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh15Q99PJ1 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh15Q99PJ1 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh15Q99PJ1 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh15Q99PJ1 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh15Q99PJ1 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh15Q99PJ1 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh15Q99PJ1 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh15Q99PJ1 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh15Q99PJ1 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Pcdh15Q99PJ1 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh15Q99PJ1 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh15Q99PJ1 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Pcdh15Q99PJ1 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh15Q99PJ1 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh15Q99PJ1 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Pcdh15Q99PJ1 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC14.39□□□□□ -0.11
Pcdh15Q99PJ1 Gm25951-201ENSMUST00000175330 64 ntBASIC14.39□□□□□ -0.11
Pcdh15Q99PJ1 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC14.39□□□□□ -0.11
Pcdh15Q99PJ1 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC14.39□□□□□ -0.11
Pcdh15Q99PJ1 AC166341.2-201ENSMUST00000220571 120 ntBASIC14.39□□□□□ -0.11
Pcdh15Q99PJ1 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Pcdh15Q99PJ1 Gm9873-201ENSMUST00000063891 1097 ntBASIC14.39□□□□□ -0.11
Pcdh15Q99PJ1 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Pcdh15Q99PJ1 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Pcdh15Q99PJ1 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh15Q99PJ1 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh15Q99PJ1 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh15Q99PJ1 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.39□□□□□ -0.11
Pcdh15Q99PJ1 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Pcdh15Q99PJ1 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh15Q99PJ1 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh15Q99PJ1 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Pcdh15Q99PJ1 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh15Q99PJ1 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh15Q99PJ1 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh15Q99PJ1 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh15Q99PJ1 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.39□□□□□ -0.11
Pcdh15Q99PJ1 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh15Q99PJ1 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC14.39□□□□□ -0.11
Pcdh15Q99PJ1 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC14.39□□□□□ -0.11
Pcdh15Q99PJ1 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh15Q99PJ1 Gm9132-201ENSMUST00000210182 832 ntBASIC14.39□□□□□ -0.11
Pcdh15Q99PJ1 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh15Q99PJ1 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Pcdh15Q99PJ1 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.39□□□□□ -0.11
Pcdh15Q99PJ1 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh15Q99PJ1 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Pcdh15Q99PJ1 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh15Q99PJ1 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh15Q99PJ1 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh15Q99PJ1 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.38□□□□□ -0.11
Pcdh15Q99PJ1 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.38□□□□□ -0.11
Pcdh15Q99PJ1 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh15Q99PJ1 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh15Q99PJ1 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh15Q99PJ1 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Pcdh15Q99PJ1 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Pcdh15Q99PJ1 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh15Q99PJ1 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh15Q99PJ1 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh15Q99PJ1 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Pcdh15Q99PJ1 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Pcdh15Q99PJ1 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh15Q99PJ1 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh15Q99PJ1 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Pcdh15Q99PJ1 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC14.38□□□□□ -0.11
Pcdh15Q99PJ1 Rprl1-201ENSMUST00000158050 327 ntBASIC14.38□□□□□ -0.11
Pcdh15Q99PJ1 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC14.38□□□□□ -0.11
Pcdh15Q99PJ1 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh15Q99PJ1 Gm2965-201ENSMUST00000198365 343 ntBASIC14.38□□□□□ -0.11
Pcdh15Q99PJ1 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC14.38□□□□□ -0.11
Pcdh15Q99PJ1 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh15Q99PJ1 AC151275.1-201ENSMUST00000224870 585 ntBASIC14.38□□□□□ -0.11
Pcdh15Q99PJ1 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh15Q99PJ1 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh15Q99PJ1 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh15Q99PJ1 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.38□□□□□ -0.11
Pcdh15Q99PJ1 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh15Q99PJ1 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Pcdh15Q99PJ1 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Pcdh15Q99PJ1 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Pcdh15Q99PJ1 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh15Q99PJ1 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms