Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf111Q99ML9 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.7□□□□□ -0.38
Rnf111Q99ML9 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf111Q99ML9 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Rnf111Q99ML9 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf111Q99ML9 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.69□□□□□ -0.38
Rnf111Q99ML9 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf111Q99ML9 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.69□□□□□ -0.38
Rnf111Q99ML9 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf111Q99ML9 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.69□□□□□ -0.38
Rnf111Q99ML9 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf111Q99ML9 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Rnf111Q99ML9 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Rnf111Q99ML9 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf111Q99ML9 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf111Q99ML9 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Rnf111Q99ML9 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf111Q99ML9 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf111Q99ML9 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Rnf111Q99ML9 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf111Q99ML9 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf111Q99ML9 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf111Q99ML9 Gm7488-201ENSMUST00000117148 684 ntBASIC12.69□□□□□ -0.38
Rnf111Q99ML9 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.69□□□□□ -0.38
Rnf111Q99ML9 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf111Q99ML9 Gm43438-201ENSMUST00000198133 379 ntBASIC12.69□□□□□ -0.38
Rnf111Q99ML9 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.69□□□□□ -0.38
Rnf111Q99ML9 Gm19220-201ENSMUST00000222682 803 ntBASIC12.69□□□□□ -0.38
Rnf111Q99ML9 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf111Q99ML9 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf111Q99ML9 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Rnf111Q99ML9 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf111Q99ML9 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.69□□□□□ -0.38
Rnf111Q99ML9 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Rnf111Q99ML9 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf111Q99ML9 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf111Q99ML9 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf111Q99ML9 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf111Q99ML9 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf111Q99ML9 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Rnf111Q99ML9 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Rnf111Q99ML9 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf111Q99ML9 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf111Q99ML9 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf111Q99ML9 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.68□□□□□ -0.38
Rnf111Q99ML9 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf111Q99ML9 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf111Q99ML9 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf111Q99ML9 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf111Q99ML9 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf111Q99ML9 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf111Q99ML9 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf111Q99ML9 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf111Q99ML9 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf111Q99ML9 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf111Q99ML9 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf111Q99ML9 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.68□□□□□ -0.38
Rnf111Q99ML9 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Rnf111Q99ML9 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Rnf111Q99ML9 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf111Q99ML9 Gm12859-201ENSMUST00000117834 427 ntBASIC12.68□□□□□ -0.38
Rnf111Q99ML9 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.68□□□□□ -0.38
Rnf111Q99ML9 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.68□□□□□ -0.38
Rnf111Q99ML9 Gm26464-201ENSMUST00000157094 305 ntBASIC12.68□□□□□ -0.38
Rnf111Q99ML9 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Rnf111Q99ML9 Mir7221-201ENSMUST00000184009 72 ntBASIC12.68□□□□□ -0.38
Rnf111Q99ML9 Gm28631-201ENSMUST00000190740 334 ntBASIC12.68□□□□□ -0.38
Rnf111Q99ML9 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.68□□□□□ -0.38
Rnf111Q99ML9 Gm45841-201ENSMUST00000207700 164 ntBASIC12.68□□□□□ -0.38
Rnf111Q99ML9 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Rnf111Q99ML9 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf111Q99ML9 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.68□□□□□ -0.38
Rnf111Q99ML9 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf111Q99ML9 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf111Q99ML9 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf111Q99ML9 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Rnf111Q99ML9 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.68□□□□□ -0.38
Rnf111Q99ML9 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf111Q99ML9 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf111Q99ML9 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf111Q99ML9 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf111Q99ML9 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf111Q99ML9 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf111Q99ML9 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf111Q99ML9 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.67□□□□□ -0.38
Rnf111Q99ML9 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf111Q99ML9 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.67□□□□□ -0.38
Rnf111Q99ML9 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf111Q99ML9 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf111Q99ML9 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf111Q99ML9 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf111Q99ML9 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Rnf111Q99ML9 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf111Q99ML9 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf111Q99ML9 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf111Q99ML9 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf111Q99ML9 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf111Q99ML9 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf111Q99ML9 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
Rnf111Q99ML9 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms