Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tlr3Q99MB1 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tlr3Q99MB1 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Tlr3Q99MB1 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tlr3Q99MB1 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Tlr3Q99MB1 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tlr3Q99MB1 Gm13226-201ENSMUST00000117838 404 ntBASIC14.04□□□□□ -0.16
Tlr3Q99MB1 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Tlr3Q99MB1 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tlr3Q99MB1 Gm45784-201ENSMUST00000188360 142 ntBASIC14.04□□□□□ -0.16
Tlr3Q99MB1 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Tlr3Q99MB1 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tlr3Q99MB1 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tlr3Q99MB1 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.04□□□□□ -0.16
Tlr3Q99MB1 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tlr3Q99MB1 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Tlr3Q99MB1 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.04□□□□□ -0.16
Tlr3Q99MB1 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tlr3Q99MB1 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tlr3Q99MB1 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tlr3Q99MB1 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.04□□□□□ -0.16
Tlr3Q99MB1 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Tlr3Q99MB1 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tlr3Q99MB1 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Tlr3Q99MB1 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tlr3Q99MB1 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Tlr3Q99MB1 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tlr3Q99MB1 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.03□□□□□ -0.16
Tlr3Q99MB1 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tlr3Q99MB1 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tlr3Q99MB1 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tlr3Q99MB1 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC14.03□□□□□ -0.16
Tlr3Q99MB1 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tlr3Q99MB1 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tlr3Q99MB1 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tlr3Q99MB1 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tlr3Q99MB1 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tlr3Q99MB1 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tlr3Q99MB1 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tlr3Q99MB1 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Tlr3Q99MB1 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tlr3Q99MB1 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tlr3Q99MB1 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tlr3Q99MB1 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Tlr3Q99MB1 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tlr3Q99MB1 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tlr3Q99MB1 Gm11814-201ENSMUST00000119515 929 ntBASIC14.03□□□□□ -0.16
Tlr3Q99MB1 Gm17420-201ENSMUST00000164753 153 ntBASIC14.03□□□□□ -0.16
Tlr3Q99MB1 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.03□□□□□ -0.16
Tlr3Q99MB1 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.03□□□□□ -0.16
Tlr3Q99MB1 Gm45331-201ENSMUST00000209868 554 ntBASIC14.03□□□□□ -0.16
Tlr3Q99MB1 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.03□□□□□ -0.16
Tlr3Q99MB1 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tlr3Q99MB1 Rassf8-202ENSMUST00000058538 1131 ntBASIC14.03□□□□□ -0.16
Tlr3Q99MB1 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Tlr3Q99MB1 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Tlr3Q99MB1 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.03□□□□□ -0.16
Tlr3Q99MB1 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Tlr3Q99MB1 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tlr3Q99MB1 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tlr3Q99MB1 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tlr3Q99MB1 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tlr3Q99MB1 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Tlr3Q99MB1 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tlr3Q99MB1 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.03□□□□□ -0.16
Tlr3Q99MB1 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tlr3Q99MB1 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Tlr3Q99MB1 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tlr3Q99MB1 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
Tlr3Q99MB1 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tlr3Q99MB1 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Tlr3Q99MB1 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Tlr3Q99MB1 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tlr3Q99MB1 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.02□□□□□ -0.16
Tlr3Q99MB1 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tlr3Q99MB1 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tlr3Q99MB1 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.02□□□□□ -0.17
Tlr3Q99MB1 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tlr3Q99MB1 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.02□□□□□ -0.17
Tlr3Q99MB1 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tlr3Q99MB1 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.02□□□□□ -0.17
Tlr3Q99MB1 Snora78-201ENSMUST00000158630 128 ntBASIC14.02□□□□□ -0.17
Tlr3Q99MB1 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Tlr3Q99MB1 Gm27847-201ENSMUST00000183711 107 ntBASIC14.02□□□□□ -0.17
Tlr3Q99MB1 Gm27375-201ENSMUST00000183799 107 ntBASIC14.02□□□□□ -0.17
Tlr3Q99MB1 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Tlr3Q99MB1 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.02□□□□□ -0.17
Tlr3Q99MB1 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.02□□□□□ -0.17
Tlr3Q99MB1 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.02□□□□□ -0.17
Tlr3Q99MB1 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.02□□□□□ -0.17
Tlr3Q99MB1 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.02□□□□□ -0.17
Tlr3Q99MB1 Gm8598-201ENSMUST00000221184 836 ntBASIC14.02□□□□□ -0.17
Tlr3Q99MB1 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC14.02□□□□□ -0.17
Tlr3Q99MB1 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tlr3Q99MB1 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Tlr3Q99MB1 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Tlr3Q99MB1 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tlr3Q99MB1 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tlr3Q99MB1 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tlr3Q99MB1 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms