Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.56□□□□□ -0.24
Cdk5rap3Q99LM2 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.56□□□□□ -0.24
Cdk5rap3Q99LM2 Gm26315-201ENSMUST00000083890 321 ntBASIC13.56□□□□□ -0.24
Cdk5rap3Q99LM2 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.56□□□□□ -0.24
Cdk5rap3Q99LM2 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.56□□□□□ -0.24
Cdk5rap3Q99LM2 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk5rap3Q99LM2 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Cdk5rap3Q99LM2 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk5rap3Q99LM2 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk5rap3Q99LM2 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Cdk5rap3Q99LM2 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cdk5rap3Q99LM2 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.56□□□□□ -0.24
Cdk5rap3Q99LM2 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk5rap3Q99LM2 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk5rap3Q99LM2 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk5rap3Q99LM2 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk5rap3Q99LM2 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.55□□□□□ -0.24
Cdk5rap3Q99LM2 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk5rap3Q99LM2 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk5rap3Q99LM2 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk5rap3Q99LM2 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk5rap3Q99LM2 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Cdk5rap3Q99LM2 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
Cdk5rap3Q99LM2 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk5rap3Q99LM2 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.55□□□□□ -0.24
Cdk5rap3Q99LM2 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk5rap3Q99LM2 Gm22189-201ENSMUST00000103822 86 ntBASIC13.55□□□□□ -0.24
Cdk5rap3Q99LM2 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.55□□□□□ -0.24
Cdk5rap3Q99LM2 Gm6447-201ENSMUST00000118905 835 ntBASIC13.55□□□□□ -0.24
Cdk5rap3Q99LM2 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk5rap3Q99LM2 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk5rap3Q99LM2 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk5rap3Q99LM2 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.55□□□□□ -0.24
Cdk5rap3Q99LM2 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.55□□□□□ -0.24
Cdk5rap3Q99LM2 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk5rap3Q99LM2 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk5rap3Q99LM2 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk5rap3Q99LM2 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk5rap3Q99LM2 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk5rap3Q99LM2 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk5rap3Q99LM2 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Cdk5rap3Q99LM2 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk5rap3Q99LM2 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Cdk5rap3Q99LM2 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk5rap3Q99LM2 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.55□□□□□ -0.24
Cdk5rap3Q99LM2 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk5rap3Q99LM2 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk5rap3Q99LM2 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk5rap3Q99LM2 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk5rap3Q99LM2 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk5rap3Q99LM2 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk5rap3Q99LM2 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk5rap3Q99LM2 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.55□□□□□ -0.24
Cdk5rap3Q99LM2 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.55□□□□□ -0.24
Cdk5rap3Q99LM2 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk5rap3Q99LM2 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.54□□□□□ -0.24
Cdk5rap3Q99LM2 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk5rap3Q99LM2 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk5rap3Q99LM2 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cdk5rap3Q99LM2 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk5rap3Q99LM2 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
Cdk5rap3Q99LM2 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk5rap3Q99LM2 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk5rap3Q99LM2 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk5rap3Q99LM2 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk5rap3Q99LM2 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk5rap3Q99LM2 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk5rap3Q99LM2 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk5rap3Q99LM2 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk5rap3Q99LM2 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.54□□□□□ -0.24
Cdk5rap3Q99LM2 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.54□□□□□ -0.24
Cdk5rap3Q99LM2 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.54□□□□□ -0.24
Cdk5rap3Q99LM2 Gm5354-201ENSMUST00000182417 973 ntBASIC13.54□□□□□ -0.24
Cdk5rap3Q99LM2 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.54□□□□□ -0.24
Cdk5rap3Q99LM2 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Cdk5rap3Q99LM2 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk5rap3Q99LM2 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk5rap3Q99LM2 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk5rap3Q99LM2 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Cdk5rap3Q99LM2 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk5rap3Q99LM2 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk5rap3Q99LM2 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk5rap3Q99LM2 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk5rap3Q99LM2 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Cdk5rap3Q99LM2 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.54□□□□□ -0.24
Cdk5rap3Q99LM2 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk5rap3Q99LM2 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk5rap3Q99LM2 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cdk5rap3Q99LM2 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk5rap3Q99LM2 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Cdk5rap3Q99LM2 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk5rap3Q99LM2 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk5rap3Q99LM2 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk5rap3Q99LM2 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Cdk5rap3Q99LM2 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap3Q99LM2 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap3Q99LM2 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap3Q99LM2 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.53□□□□□ -0.24
Cdk5rap3Q99LM2 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap3Q99LM2 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms