Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clp1Q99LI9 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clp1Q99LI9 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Clp1Q99LI9 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clp1Q99LI9 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clp1Q99LI9 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Clp1Q99LI9 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clp1Q99LI9 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clp1Q99LI9 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clp1Q99LI9 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clp1Q99LI9 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC13.73□□□□□ -0.21
Clp1Q99LI9 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Clp1Q99LI9 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clp1Q99LI9 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Clp1Q99LI9 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clp1Q99LI9 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Clp1Q99LI9 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clp1Q99LI9 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clp1Q99LI9 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.73□□□□□ -0.21
Clp1Q99LI9 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.73□□□□□ -0.21
Clp1Q99LI9 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clp1Q99LI9 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clp1Q99LI9 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clp1Q99LI9 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clp1Q99LI9 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clp1Q99LI9 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clp1Q99LI9 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Clp1Q99LI9 Gm11331-201ENSMUST00000119764 288 ntBASIC13.73□□□□□ -0.21
Clp1Q99LI9 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clp1Q99LI9 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC13.73□□□□□ -0.21
Clp1Q99LI9 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13.73□□□□□ -0.21
Clp1Q99LI9 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Clp1Q99LI9 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clp1Q99LI9 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC13.73□□□□□ -0.21
Clp1Q99LI9 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clp1Q99LI9 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Clp1Q99LI9 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Clp1Q99LI9 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clp1Q99LI9 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clp1Q99LI9 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clp1Q99LI9 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Clp1Q99LI9 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clp1Q99LI9 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clp1Q99LI9 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.73□□□□□ -0.21
Clp1Q99LI9 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clp1Q99LI9 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.73□□□□□ -0.21
Clp1Q99LI9 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.73□□□□□ -0.21
Clp1Q99LI9 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC13.73□□□□□ -0.21
Clp1Q99LI9 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clp1Q99LI9 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clp1Q99LI9 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Clp1Q99LI9 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clp1Q99LI9 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clp1Q99LI9 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clp1Q99LI9 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clp1Q99LI9 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clp1Q99LI9 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.72□□□□□ -0.21
Clp1Q99LI9 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clp1Q99LI9 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Clp1Q99LI9 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clp1Q99LI9 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.72□□□□□ -0.21
Clp1Q99LI9 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clp1Q99LI9 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clp1Q99LI9 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Clp1Q99LI9 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clp1Q99LI9 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clp1Q99LI9 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clp1Q99LI9 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC13.72□□□□□ -0.21
Clp1Q99LI9 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC13.72□□□□□ -0.21
Clp1Q99LI9 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC13.72□□□□□ -0.21
Clp1Q99LI9 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Clp1Q99LI9 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.72□□□□□ -0.21
Clp1Q99LI9 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.72□□□□□ -0.21
Clp1Q99LI9 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.72□□□□□ -0.21
Clp1Q99LI9 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clp1Q99LI9 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Clp1Q99LI9 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Clp1Q99LI9 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clp1Q99LI9 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clp1Q99LI9 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clp1Q99LI9 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clp1Q99LI9 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.72□□□□□ -0.21
Clp1Q99LI9 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Clp1Q99LI9 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clp1Q99LI9 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clp1Q99LI9 CU062626.3-201ENSMUST00000225522 1411 ntBASIC13.72□□□□□ -0.21
Clp1Q99LI9 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Clp1Q99LI9 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Clp1Q99LI9 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clp1Q99LI9 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Clp1Q99LI9 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clp1Q99LI9 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Clp1Q99LI9 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.71□□□□□ -0.21
Clp1Q99LI9 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clp1Q99LI9 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clp1Q99LI9 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clp1Q99LI9 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clp1Q99LI9 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Clp1Q99LI9 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clp1Q99LI9 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms