Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gm12266-201ENSMUST00000120311 962 ntBASIC16.05■□□□□ 0.16
RtcbQ99LF4 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RtcbQ99LF4 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RtcbQ99LF4 Ighv5-7-201ENSMUST00000192302 244 ntBASIC16.05■□□□□ 0.16
RtcbQ99LF4 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC16.05■□□□□ 0.16
RtcbQ99LF4 Gm18730-201ENSMUST00000218038 343 ntBASIC16.05■□□□□ 0.16
RtcbQ99LF4 AC131330.1-201ENSMUST00000227814 1015 ntBASIC16.05■□□□□ 0.16
RtcbQ99LF4 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RtcbQ99LF4 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
RtcbQ99LF4 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RtcbQ99LF4 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RtcbQ99LF4 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RtcbQ99LF4 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RtcbQ99LF4 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RtcbQ99LF4 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RtcbQ99LF4 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RtcbQ99LF4 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RtcbQ99LF4 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RtcbQ99LF4 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RtcbQ99LF4 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RtcbQ99LF4 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RtcbQ99LF4 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RtcbQ99LF4 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
RtcbQ99LF4 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RtcbQ99LF4 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RtcbQ99LF4 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RtcbQ99LF4 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RtcbQ99LF4 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC16.04■□□□□ 0.16
RtcbQ99LF4 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RtcbQ99LF4 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RtcbQ99LF4 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC16.04■□□□□ 0.16
RtcbQ99LF4 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC16.04■□□□□ 0.16
RtcbQ99LF4 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC16.04■□□□□ 0.16
RtcbQ99LF4 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RtcbQ99LF4 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC16.04■□□□□ 0.16
RtcbQ99LF4 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC16.04■□□□□ 0.16
RtcbQ99LF4 Gm9211-201ENSMUST00000182882 975 ntBASIC16.04■□□□□ 0.16
RtcbQ99LF4 Gm6652-201ENSMUST00000186414 1070 ntBASIC16.04■□□□□ 0.16
RtcbQ99LF4 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC16.04■□□□□ 0.16
RtcbQ99LF4 AC107638.1-201ENSMUST00000213690 1061 ntBASIC16.04■□□□□ 0.16
RtcbQ99LF4 AC141438.2-201ENSMUST00000215068 271 ntBASIC16.04■□□□□ 0.16
RtcbQ99LF4 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RtcbQ99LF4 AC135114.1-201ENSMUST00000228682 270 ntBASIC16.04■□□□□ 0.16
RtcbQ99LF4 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RtcbQ99LF4 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RtcbQ99LF4 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC16.04■□□□□ 0.16
RtcbQ99LF4 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RtcbQ99LF4 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RtcbQ99LF4 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RtcbQ99LF4 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RtcbQ99LF4 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RtcbQ99LF4 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
RtcbQ99LF4 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
RtcbQ99LF4 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RtcbQ99LF4 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RtcbQ99LF4 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RtcbQ99LF4 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
RtcbQ99LF4 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RtcbQ99LF4 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RtcbQ99LF4 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RtcbQ99LF4 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RtcbQ99LF4 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC16.03■□□□□ 0.16
RtcbQ99LF4 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RtcbQ99LF4 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
RtcbQ99LF4 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RtcbQ99LF4 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
RtcbQ99LF4 Gm6963-201ENSMUST00000147879 379 ntBASIC16.03■□□□□ 0.16
RtcbQ99LF4 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
RtcbQ99LF4 Gm5070-201ENSMUST00000177599 862 ntBASIC16.03■□□□□ 0.16
RtcbQ99LF4 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
RtcbQ99LF4 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC16.03■□□□□ 0.16
RtcbQ99LF4 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RtcbQ99LF4 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC16.03■□□□□ 0.16
RtcbQ99LF4 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RtcbQ99LF4 Aprt-ps-201ENSMUST00000212311 505 ntBASIC16.03■□□□□ 0.16
RtcbQ99LF4 AC166344.1-202ENSMUST00000224139 234 ntBASIC16.03■□□□□ 0.16
RtcbQ99LF4 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RtcbQ99LF4 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
RtcbQ99LF4 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RtcbQ99LF4 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RtcbQ99LF4 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RtcbQ99LF4 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
RtcbQ99LF4 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RtcbQ99LF4 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RtcbQ99LF4 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC16.02■□□□□ 0.16
RtcbQ99LF4 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RtcbQ99LF4 Gm4782-201ENSMUST00000168705 2046 ntBASIC16.02■□□□□ 0.16
RtcbQ99LF4 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RtcbQ99LF4 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RtcbQ99LF4 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RtcbQ99LF4 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RtcbQ99LF4 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC16.02■□□□□ 0.16
RtcbQ99LF4 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RtcbQ99LF4 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
RtcbQ99LF4 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RtcbQ99LF4 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RtcbQ99LF4 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RtcbQ99LF4 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RtcbQ99LF4 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RtcbQ99LF4 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms