Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rfc4Q99J62 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rfc4Q99J62 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rfc4Q99J62 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rfc4Q99J62 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Rfc4Q99J62 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Rfc4Q99J62 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rfc4Q99J62 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rfc4Q99J62 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rfc4Q99J62 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rfc4Q99J62 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rfc4Q99J62 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rfc4Q99J62 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rfc4Q99J62 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rfc4Q99J62 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rfc4Q99J62 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rfc4Q99J62 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rfc4Q99J62 Gm14752-201ENSMUST00000120719 2075 ntBASIC15.02■□□□□ -0
Rfc4Q99J62 Gm19221-201ENSMUST00000221827 1477 ntBASIC15.02■□□□□ -0
Rfc4Q99J62 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rfc4Q99J62 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rfc4Q99J62 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rfc4Q99J62 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rfc4Q99J62 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC15.02■□□□□ -0
Rfc4Q99J62 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rfc4Q99J62 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Rfc4Q99J62 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rfc4Q99J62 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Rfc4Q99J62 Gm27341-201ENSMUST00000183570 106 ntBASIC15.02■□□□□ -0
Rfc4Q99J62 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC15.02■□□□□ -0
Rfc4Q99J62 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rfc4Q99J62 Gm19208-201ENSMUST00000213861 912 ntBASIC15.02■□□□□ -0
Rfc4Q99J62 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rfc4Q99J62 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Rfc4Q99J62 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC15.02□□□□□ -0.01
Rfc4Q99J62 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rfc4Q99J62 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Rfc4Q99J62 Gm43273-201ENSMUST00000199649 2594 ntBASIC15.02□□□□□ -0.01
Rfc4Q99J62 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Rfc4Q99J62 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rfc4Q99J62 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rfc4Q99J62 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rfc4Q99J62 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Rfc4Q99J62 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rfc4Q99J62 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
Rfc4Q99J62 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC15.01□□□□□ -0.01
Rfc4Q99J62 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfc4Q99J62 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Rfc4Q99J62 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rfc4Q99J62 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfc4Q99J62 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Rfc4Q99J62 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rfc4Q99J62 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfc4Q99J62 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfc4Q99J62 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfc4Q99J62 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfc4Q99J62 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Rfc4Q99J62 Gm11531-201ENSMUST00000117614 555 ntBASIC15.01□□□□□ -0.01
Rfc4Q99J62 Gm14130-201ENSMUST00000118417 987 ntBASIC15.01□□□□□ -0.01
Rfc4Q99J62 Gm11439-201ENSMUST00000118598 409 ntBASIC15.01□□□□□ -0.01
Rfc4Q99J62 Gm4909-201ENSMUST00000118749 794 ntBASIC15.01□□□□□ -0.01
Rfc4Q99J62 Gm14277-201ENSMUST00000121195 360 ntBASIC15.01□□□□□ -0.01
Rfc4Q99J62 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
Rfc4Q99J62 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rfc4Q99J62 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Rfc4Q99J62 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfc4Q99J62 Gm2546-201ENSMUST00000182630 991 ntBASIC15.01□□□□□ -0.01
Rfc4Q99J62 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC15.01□□□□□ -0.01
Rfc4Q99J62 Mir6979-201ENSMUST00000183927 56 ntBASIC15.01□□□□□ -0.01
Rfc4Q99J62 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC15.01□□□□□ -0.01
Rfc4Q99J62 Gm5950-201ENSMUST00000213337 772 ntBASIC15.01□□□□□ -0.01
Rfc4Q99J62 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Rfc4Q99J62 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfc4Q99J62 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfc4Q99J62 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC15.01□□□□□ -0.01
Rfc4Q99J62 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfc4Q99J62 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfc4Q99J62 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfc4Q99J62 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfc4Q99J62 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfc4Q99J62 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC15.01□□□□□ -0.01
Rfc4Q99J62 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfc4Q99J62 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfc4Q99J62 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.01□□□□□ -0.01
Rfc4Q99J62 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfc4Q99J62 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC15□□□□□ -0.01
Rfc4Q99J62 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Rfc4Q99J62 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rfc4Q99J62 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfc4Q99J62 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfc4Q99J62 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC15□□□□□ -0.01
Rfc4Q99J62 AC167669.2-201ENSMUST00000224417 1620 ntBASIC15□□□□□ -0.01
Rfc4Q99J62 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfc4Q99J62 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Rfc4Q99J62 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfc4Q99J62 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rfc4Q99J62 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Rfc4Q99J62 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rfc4Q99J62 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfc4Q99J62 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms