Protein–RNA interactions for Protein: Q99J19

Smim11a, Small integral membrane protein 11A, mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim11aQ99J19 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smim11aQ99J19 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.82□□□□□ -0.36
Smim11aQ99J19 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim11aQ99J19 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim11aQ99J19 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim11aQ99J19 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim11aQ99J19 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smim11aQ99J19 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim11aQ99J19 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim11aQ99J19 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim11aQ99J19 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smim11aQ99J19 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim11aQ99J19 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim11aQ99J19 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim11aQ99J19 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Smim11aQ99J19 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smim11aQ99J19 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim11aQ99J19 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Smim11aQ99J19 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim11aQ99J19 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim11aQ99J19 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim11aQ99J19 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim11aQ99J19 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim11aQ99J19 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.81□□□□□ -0.36
Smim11aQ99J19 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.81□□□□□ -0.36
Smim11aQ99J19 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim11aQ99J19 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim11aQ99J19 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim11aQ99J19 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim11aQ99J19 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.81□□□□□ -0.36
Smim11aQ99J19 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smim11aQ99J19 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim11aQ99J19 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim11aQ99J19 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smim11aQ99J19 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim11aQ99J19 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim11aQ99J19 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim11aQ99J19 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.81□□□□□ -0.36
Smim11aQ99J19 Gm15376-201ENSMUST00000122258 783 ntBASIC12.81□□□□□ -0.36
Smim11aQ99J19 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smim11aQ99J19 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.81□□□□□ -0.36
Smim11aQ99J19 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.81□□□□□ -0.36
Smim11aQ99J19 Gm27306-201ENSMUST00000183970 107 ntBASIC12.81□□□□□ -0.36
Smim11aQ99J19 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.81□□□□□ -0.36
Smim11aQ99J19 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim11aQ99J19 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim11aQ99J19 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim11aQ99J19 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim11aQ99J19 Gm20445-201ENSMUST00000061905 565 ntBASIC12.81□□□□□ -0.36
Smim11aQ99J19 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim11aQ99J19 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim11aQ99J19 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim11aQ99J19 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.81□□□□□ -0.36
Smim11aQ99J19 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.81□□□□□ -0.36
Smim11aQ99J19 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smim11aQ99J19 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smim11aQ99J19 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Smim11aQ99J19 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smim11aQ99J19 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim11aQ99J19 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smim11aQ99J19 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Smim11aQ99J19 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim11aQ99J19 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim11aQ99J19 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smim11aQ99J19 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim11aQ99J19 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim11aQ99J19 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim11aQ99J19 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smim11aQ99J19 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim11aQ99J19 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim11aQ99J19 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim11aQ99J19 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.8□□□□□ -0.36
Smim11aQ99J19 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim11aQ99J19 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim11aQ99J19 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.8□□□□□ -0.36
Smim11aQ99J19 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim11aQ99J19 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim11aQ99J19 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Smim11aQ99J19 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim11aQ99J19 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smim11aQ99J19 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim11aQ99J19 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.8□□□□□ -0.36
Smim11aQ99J19 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim11aQ99J19 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.8□□□□□ -0.36
Smim11aQ99J19 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.8□□□□□ -0.36
Smim11aQ99J19 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.8□□□□□ -0.36
Smim11aQ99J19 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.8□□□□□ -0.36
Smim11aQ99J19 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.8□□□□□ -0.36
Smim11aQ99J19 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.8□□□□□ -0.36
Smim11aQ99J19 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Smim11aQ99J19 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smim11aQ99J19 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Smim11aQ99J19 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.8□□□□□ -0.36
Smim11aQ99J19 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smim11aQ99J19 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smim11aQ99J19 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Smim11aQ99J19 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.8□□□□□ -0.36
Smim11aQ99J19 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim11aQ99J19 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim11aQ99J19 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 92.1 ms