Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Smc1bQ920F6 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Smc1bQ920F6 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smc1bQ920F6 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Smc1bQ920F6 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Smc1bQ920F6 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC15.1■□□□□ 0.01
Smc1bQ920F6 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smc1bQ920F6 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smc1bQ920F6 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC15.1■□□□□ 0.01
Smc1bQ920F6 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smc1bQ920F6 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smc1bQ920F6 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smc1bQ920F6 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Smc1bQ920F6 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC15.1■□□□□ 0.01
Smc1bQ920F6 Gm14381-201ENSMUST00000122105 414 ntBASIC15.1■□□□□ 0.01
Smc1bQ920F6 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC15.1■□□□□ 0.01
Smc1bQ920F6 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Smc1bQ920F6 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smc1bQ920F6 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Smc1bQ920F6 Ighv1-62-201ENSMUST00000193406 350 ntBASIC15.1■□□□□ 0.01
Smc1bQ920F6 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC15.1■□□□□ 0.01
Smc1bQ920F6 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Smc1bQ920F6 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smc1bQ920F6 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smc1bQ920F6 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Smc1bQ920F6 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smc1bQ920F6 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smc1bQ920F6 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smc1bQ920F6 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smc1bQ920F6 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Smc1bQ920F6 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC15.1■□□□□ 0.01
Smc1bQ920F6 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Smc1bQ920F6 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Smc1bQ920F6 Gm6203-201ENSMUST00000209575 1342 ntBASIC15.1■□□□□ 0.01
Smc1bQ920F6 Gm14752-201ENSMUST00000120719 2075 ntBASIC15.1■□□□□ 0.01
Smc1bQ920F6 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smc1bQ920F6 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Smc1bQ920F6 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Smc1bQ920F6 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smc1bQ920F6 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smc1bQ920F6 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smc1bQ920F6 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Smc1bQ920F6 Gm44207-201ENSMUST00000204568 1424 ntBASIC15.09■□□□□ 0.01
Smc1bQ920F6 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Smc1bQ920F6 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Smc1bQ920F6 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smc1bQ920F6 Gm42829-201ENSMUST00000198417 2585 ntBASIC15.09■□□□□ 0.01
Smc1bQ920F6 Gm37861-201ENSMUST00000193534 2869 ntBASIC15.09■□□□□ 0.01
Smc1bQ920F6 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smc1bQ920F6 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Smc1bQ920F6 Gm13369-201ENSMUST00000119442 987 ntBASIC15.09■□□□□ 0.01
Smc1bQ920F6 Gm11400-201ENSMUST00000120853 1214 ntBASIC15.09■□□□□ 0.01
Smc1bQ920F6 Gm13786-201ENSMUST00000122371 333 ntBASIC15.09■□□□□ 0.01
Smc1bQ920F6 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC15.09■□□□□ 0.01
Smc1bQ920F6 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smc1bQ920F6 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC15.09■□□□□ 0.01
Smc1bQ920F6 AC155637.1-201ENSMUST00000218560 636 ntBASIC15.09■□□□□ 0.01
Smc1bQ920F6 Tyms-ps-201ENSMUST00000219550 915 ntBASIC15.09■□□□□ 0.01
Smc1bQ920F6 AC154595.3-201ENSMUST00000224579 384 ntBASIC15.09■□□□□ 0.01
Smc1bQ920F6 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smc1bQ920F6 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smc1bQ920F6 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Smc1bQ920F6 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smc1bQ920F6 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smc1bQ920F6 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smc1bQ920F6 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smc1bQ920F6 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Smc1bQ920F6 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC15.09■□□□□ 0.01
Smc1bQ920F6 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smc1bQ920F6 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smc1bQ920F6 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Smc1bQ920F6 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Smc1bQ920F6 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC15.08■□□□□ 0.01
Smc1bQ920F6 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Smc1bQ920F6 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Smc1bQ920F6 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC15.08■□□□□ 0.01
Smc1bQ920F6 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15.08■□□□□ 0.01
Smc1bQ920F6 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Smc1bQ920F6 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
Smc1bQ920F6 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Smc1bQ920F6 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Smc1bQ920F6 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smc1bQ920F6 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC15.08■□□□□ 0
Smc1bQ920F6 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC15.08■□□□□ 0
Smc1bQ920F6 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC15.08■□□□□ 0
Smc1bQ920F6 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smc1bQ920F6 Gm24255-201ENSMUST00000104481 128 ntBASIC15.08■□□□□ 0
Smc1bQ920F6 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC15.08■□□□□ 0
Smc1bQ920F6 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC15.08■□□□□ 0
Smc1bQ920F6 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC15.08■□□□□ 0
Smc1bQ920F6 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smc1bQ920F6 Gm2383-201ENSMUST00000181461 807 ntBASIC15.08■□□□□ 0
Smc1bQ920F6 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC15.08■□□□□ 0
Smc1bQ920F6 Gm37497-201ENSMUST00000195830 798 ntBASIC15.08■□□□□ 0
Smc1bQ920F6 Gm5363-201ENSMUST00000211927 938 ntBASIC15.08■□□□□ 0
Smc1bQ920F6 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC15.08■□□□□ 0
Smc1bQ920F6 Gm10608-202ENSMUST00000213924 676 ntBASIC15.08■□□□□ 0
Smc1bQ920F6 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC15.08■□□□□ 0
Smc1bQ920F6 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smc1bQ920F6 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms