Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb4Q91XZ6 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb4Q91XZ6 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb4Q91XZ6 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb4Q91XZ6 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb4Q91XZ6 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb4Q91XZ6 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb4Q91XZ6 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.02□□□□□ -0.33
Pcdhb4Q91XZ6 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb4Q91XZ6 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb4Q91XZ6 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.02□□□□□ -0.33
Pcdhb4Q91XZ6 Gm5354-201ENSMUST00000182417 973 ntBASIC13.02□□□□□ -0.33
Pcdhb4Q91XZ6 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC13.02□□□□□ -0.33
Pcdhb4Q91XZ6 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.02□□□□□ -0.33
Pcdhb4Q91XZ6 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb4Q91XZ6 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.02□□□□□ -0.33
Pcdhb4Q91XZ6 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb4Q91XZ6 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb4Q91XZ6 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Pcdhb4Q91XZ6 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb4Q91XZ6 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.02□□□□□ -0.33
Pcdhb4Q91XZ6 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb4Q91XZ6 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.02□□□□□ -0.33
Pcdhb4Q91XZ6 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb4Q91XZ6 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.02□□□□□ -0.33
Pcdhb4Q91XZ6 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb4Q91XZ6 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb4Q91XZ6 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb4Q91XZ6 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb4Q91XZ6 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb4Q91XZ6 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Pcdhb4Q91XZ6 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb4Q91XZ6 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.01□□□□□ -0.33
Pcdhb4Q91XZ6 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.01□□□□□ -0.33
Pcdhb4Q91XZ6 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Pcdhb4Q91XZ6 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Pcdhb4Q91XZ6 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb4Q91XZ6 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb4Q91XZ6 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb4Q91XZ6 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb4Q91XZ6 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb4Q91XZ6 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb4Q91XZ6 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb4Q91XZ6 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb4Q91XZ6 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Pcdhb4Q91XZ6 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb4Q91XZ6 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Pcdhb4Q91XZ6 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb4Q91XZ6 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.01□□□□□ -0.33
Pcdhb4Q91XZ6 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Pcdhb4Q91XZ6 Gm6218-201ENSMUST00000219812 628 ntBASIC13.01□□□□□ -0.33
Pcdhb4Q91XZ6 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb4Q91XZ6 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb4Q91XZ6 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdhb4Q91XZ6 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb4Q91XZ6 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.01□□□□□ -0.33
Pcdhb4Q91XZ6 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb4Q91XZ6 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb4Q91XZ6 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb4Q91XZ6 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.01□□□□□ -0.33
Pcdhb4Q91XZ6 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb4Q91XZ6 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb4Q91XZ6 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb4Q91XZ6 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb4Q91XZ6 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb4Q91XZ6 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb4Q91XZ6 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb4Q91XZ6 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb4Q91XZ6 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb4Q91XZ6 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb4Q91XZ6 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb4Q91XZ6 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb4Q91XZ6 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb4Q91XZ6 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb4Q91XZ6 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb4Q91XZ6 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb4Q91XZ6 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pcdhb4Q91XZ6 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb4Q91XZ6 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb4Q91XZ6 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb4Q91XZ6 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb4Q91XZ6 Gm37014-201ENSMUST00000194723 2253 ntBASIC13□□□□□ -0.33
Pcdhb4Q91XZ6 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb4Q91XZ6 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb4Q91XZ6 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13□□□□□ -0.33
Pcdhb4Q91XZ6 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb4Q91XZ6 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb4Q91XZ6 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb4Q91XZ6 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb4Q91XZ6 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb4Q91XZ6 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb4Q91XZ6 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb4Q91XZ6 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb4Q91XZ6 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb4Q91XZ6 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb4Q91XZ6 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13□□□□□ -0.33
Pcdhb4Q91XZ6 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb4Q91XZ6 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb4Q91XZ6 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13□□□□□ -0.33
Pcdhb4Q91XZ6 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 154 ms